dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002894_13|CGC1
Gene ID: MGYG000002894_00780
Location and strand information: 25848 - 27092 (+)
Family: GH18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5091
Protein molecular weight: 45098.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002894_13|CGC1
Gene ID: MGYG000002894_00781
Location and strand information: 27073 - 28071 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor PurR

Gene clsuter ID: MGYG000002894_13|CGC1
Gene ID: MGYG000002894_00782
Location and strand information: 28253 - 31243 (+)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0305
Protein molecular weight: 109719.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002894_13|CGC1
Gene ID: MGYG000002894_00783
Location and strand information: 31243 - 32400 (+)
Family: GH5_18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5529
Protein molecular weight: 43474.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002894_13|CGC1
Gene ID: MGYG000002894_00784
Location and strand information: 32390 - 33658 (+)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0939
Protein molecular weight: 47350.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002894_13|CGC1
Gene ID: MGYG000002894_00785
Location and strand information: 33679 - 34989 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002894_13|CGC1
Gene ID: MGYG000002894_00786
Location and strand information: 35008 - 35928 (+)
Family: 3.A.1.1.7
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002894_13|CGC1
Gene ID: MGYG000002894_00787
Location and strand information: 35925 - 36800 (+)
Family: 3.A.1.1.23
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002894_00780	hypothetical protein	CAZyme	25848	27092	+	GH18
MGYG000002894_00781	HTH-type transcriptional repressor PurR	TF	27073	28071	-	LacI
MGYG000002894_00782	hypothetical protein	CAZyme	28253	31243	+	GH38
MGYG000002894_00783	hypothetical protein	CAZyme	31243	32400	+	GH5_18
MGYG000002894_00784	hypothetical protein	CAZyme	32390	33658	+	GH20
MGYG000002894_00785	hypothetical protein	STP	33679	34989	+	SBP_bac_1
MGYG000002894_00786	Lactose transport system permease protein LacF	TC	35008	35928	+	3.A.1.1.7
MGYG000002894_00787	hypothetical protein	TC	35925	36800	+	3.A.1.1.23
Protein ID	Protein Name	Type	Start	End	Strand	Signature