dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00284
Location and strand information: 56442 - 59060 (-)
Family: 3.A.3.2.21
Protein type: TC
Protein description: Calcium-transporting ATPase 1

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00285
Location and strand information: 59354 - 60823 (-)
Family: CE4
Protein type: CAZyme
Protein description: Peptidoglycan-N-acetylmuramic acid deacetylase PdaC
Protein isoelectric point: 4.3958
Protein molecular weight: 54532.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00286
Location and strand information: 61242 - 61952 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport ATP-binding protein LivF

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00287
Location and strand information: 61955 - 62716 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00288
Location and strand information: 62720 - 63697 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00289
Location and strand information: 63710 - 64591 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport system permease protein LivH

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00290
Location and strand information: 64715 - 65896 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00291
Location and strand information: 66848 - 68500 (-)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Oligopeptide-binding protein OppA

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00292
Location and strand information: 68611 - 69579 (-)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00293
Location and strand information: 69572 - 70594 (-)
Family: 3.A.1.5.41
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00294
Location and strand information: 70606 - 71664 (-)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Oligopeptide transport system permease protein OppC

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00295
Location and strand information: 71683 - 72600 (-)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Dipeptide transport system permease protein DppB

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00296
Location and strand information: 73414 - 73917 (-)
Family: Sigma70_r4_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00297
Location and strand information: 74149 - 74625 (-)
Family: 4.A.1.1.1
Protein type: TC
Protein description: PTS system glucose-specific EIIA component

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00298
Location and strand information: 74873 - 76324 (-)
Family: 4.A.1.1.7
Protein type: TC
Protein description: PTS system N-acetylglucosamine-specific EIICBA component

Gene clsuter ID: MGYG000003004_3|CGC1
Gene ID: MGYG000003004_00299
Location and strand information: 76385 - 78034 (-)
Family: 8.A.7.1.1
Protein type: TC
Protein description: Phosphoenolpyruvate-protein phosphotransferase

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003004_00284	Calcium-transporting ATPase 1	TC	56442	59060	-	3.A.3.2.21
MGYG000003004_00285	Peptidoglycan-N-acetylmuramic acid deacetylase PdaC	CAZyme	59354	60823	-	CE4
MGYG000003004_00286	High-affinity branched-chain amino acid transport ATP-binding protein LivF	TC	61242	61952	-	3.A.1.4.10
MGYG000003004_00287	Lipopolysaccharide export system ATP-binding protein LptB	TC	61955	62716	-	3.A.1.4.10
MGYG000003004_00288	hypothetical protein	TC	62720	63697	-	3.A.1.4.10
MGYG000003004_00289	High-affinity branched-chain amino acid transport system permease protein LivH	TC	63710	64591	-	3.A.1.4.10
MGYG000003004_00290	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein	TC	64715	65896	-	3.A.1.4.10
MGYG000003004_00291	Oligopeptide-binding protein OppA	TC	66848	68500	-	3.A.1.5.2
MGYG000003004_00292	Oligopeptide transport ATP-binding protein OppF	TC	68611	69579	-	3.A.1.5.20
MGYG000003004_00293	Oligopeptide transport ATP-binding protein OppD	TC	69572	70594	-	3.A.1.5.41
MGYG000003004_00294	Oligopeptide transport system permease protein OppC	TC	70606	71664	-	3.A.1.5.2
MGYG000003004_00295	Dipeptide transport system permease protein DppB	TC	71683	72600	-	3.A.1.5.2
MGYG000003004_00296	hypothetical protein	STP	73414	73917	-	Sigma70_r4_2
MGYG000003004_00297	PTS system glucose-specific EIIA component	TC	74149	74625	-	4.A.1.1.1
MGYG000003004_00298	PTS system N-acetylglucosamine-specific EIICBA component	TC	74873	76324	-	4.A.1.1.7
MGYG000003004_00299	Phosphoenolpyruvate-protein phosphotransferase	TC	76385	78034	-	8.A.7.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature