logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000003042_11|CGC2

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Created with SnapCAZymeTCTF49654513985314354887566325837660121618656361065354

Gene composition table

Protein IDProtein NameTypeStartEndStrandSignature
MGYG000003042_01779
Non-reducing end alpha-L-arabinofuranosidase BoGH43A
CAZyme 49654 51216 - GH43_12| GH43
MGYG000003042_01780
L-arabinose transport system permease protein AraQ
TC 51391 52278 - 3.A.1.1.29
MGYG000003042_01781
putative multiple-sugar transport system permease YteP
TC 52292 53215 - 3.A.1.1.29
MGYG000003042_01782
hypothetical protein
TC 53380 55050 - 3.A.1.1.29
MGYG000003042_01783
Regulator of RpoS
TF 55351 56958 - HTH_AraC
MGYG000003042_01784
hypothetical protein
TC 56960 58726 - 9.B.33.1.1
MGYG000003042_01785
hypothetical protein
TC 58908 59600 + 9.B.28.1.3
MGYG000003042_01786
Intracellular exo-alpha-L-arabinofuranosidase 2
CAZyme 59933 61429 - GH51
MGYG000003042_01787
Reducing end xylose-releasing exo-oligoxylanase
CAZyme 61527 62693 - GH8
MGYG000003042_01788
hypothetical protein
CAZyme 63226 64911 + CE17
Protein IDProtein NameTypeStartEndStrandSignature
Showing 1 to 10 of 11 entries

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is arabinan download this fig


Genomic location

1,916 Pageviews
Mar. 15th - Apr. 15th