dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00380
Location and strand information: 478548 - 479705 (+)
Family: PL10_1|CE19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7254
Protein molecular weight: 43661.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00381
Location and strand information: 479799 - 481526 (-)
Family: CE8|CE12|CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.98
Protein molecular weight: 64362.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00382
Location and strand information: 481623 - 483245 (-)
Family: PL10|PL10_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4431
Protein molecular weight: 61424.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00383
Location and strand information: 483269 - 483667 (+)
Family: AraC_binding
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00384
Location and strand information: 483654 - 488060 (-)
Family: PL10_1|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.2987
Protein molecular weight: 166545.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00385
Location and strand information: 488178 - 490322 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00386
Location and strand information: 490343 - 493576 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00387
Location and strand information: 493805 - 495823 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00388
Location and strand information: 495836 - 498907 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00389
Location and strand information: 499148 - 500110 (-)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 8.3361
Protein molecular weight: 36083.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00390
Location and strand information: 500110 - 501324 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 8.111
Protein molecular weight: 46436.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00391
Location and strand information: 501593 - 503059 (+)
Family: 2.A.1.14.25
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00392
Location and strand information: 503736 - 507143 (-)
Family: null
Protein type: null
Protein description: RecBCD enzyme subunit RecD

Gene clsuter ID: MGYG000003064_1|CGC11
Gene ID: MGYG000003064_00393
Location and strand information: 507136 - 507936 (-)
Family: 2.A.64.3.2
Protein type: TC
Protein description: Sec-independent protein translocase protein TatCy

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003064_00380
MGYG000003064_00381	CE8_e6\|CE4_e36\|CE12_e9
MGYG000003064_00382	PL10_e15\|4.2.2.2	pectin
MGYG000003064_00384	GH2_e58
MGYG000003064_00389	CE8_e34
MGYG000003064_00390	GH105_e8\|3.2.1.-	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003064_00380	hypothetical protein	CAZyme	478548	479705	+	PL10_1\| CE19
MGYG000003064_00381	hypothetical protein	CAZyme	479799	481526	-	CE8\| CE12\| CE4
MGYG000003064_00382	hypothetical protein	CAZyme	481623	483245	-	PL10\| PL10_2
MGYG000003064_00383	hypothetical protein	STP	483269	483667	+	AraC_binding
MGYG000003064_00384	Beta-galactosidase	CAZyme	483654	488060	-	PL10_1\| GH2
MGYG000003064_00385	hypothetical protein	null	488178	490322	-	SusD-like_3\| SusD_RagB
MGYG000003064_00386	hypothetical protein	TC	490343	493576	-	1.B.14.6.1
MGYG000003064_00387	hypothetical protein	null	493805	495823	-	SusD-like_3\| SusD_RagB
MGYG000003064_00388	TonB-dependent receptor SusC	TC	495836	498907	-	1.B.14.6.1
MGYG000003064_00389	Pectinesterase A	CAZyme	499148	500110	-	CE8
MGYG000003064_00390	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	500110	501324	-	GH105
MGYG000003064_00391	Hexuronate transporter	TC	501593	503059	+	2.A.1.14.25
MGYG000003064_00392	RecBCD enzyme subunit RecD	null	503736	507143	-	AAA_11\| AAA_11\| AAA_12
MGYG000003064_00393	Sec-independent protein translocase protein TatCy	TC	507136	507936	-	2.A.64.3.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature