dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00587
Location and strand information: 121326 - 123902 (-)
Family: 1.B.14.6.14
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00588
Location and strand information: 124088 - 125173 (-)
Family: null
Protein type: null
Protein description: UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00589
Location and strand information: 125259 - 125876 (+)
Family: 1.A.62.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00590
Location and strand information: 126072 - 126575 (+)
Family: Sigma70_r2+Sigma70_r4_2
Protein type: STP
Protein description: ECF RNA polymerase sigma factor SigH

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00591
Location and strand information: 126862 - 128637 (+)
Family: 3.B.1.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00592
Location and strand information: 128724 - 129410 (-)
Family: GT51
Protein type: CAZyme
Protein description: Biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 10.7693
Protein molecular weight: 26402.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00593
Location and strand information: 129528 - 130199 (-)
Family: 9.B.186.1.3
Protein type: TC
Protein description: putative lipoprotein YiaD

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00594
Location and strand information: 130323 - 131675 (-)
Family: 2.A.66.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00595
Location and strand information: 131869 - 132756 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00596
Location and strand information: 132815 - 134305 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00597
Location and strand information: 134338 - 137670 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00598
Location and strand information: 137683 - 139866 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00599
Location and strand information: 140067 - 141755 (+)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6746
Protein molecular weight: 62446.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00600
Location and strand information: 141767 - 142444 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00601
Location and strand information: 142635 - 143558 (+)
Family: GH43_18|GH43|3.2.1.55
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2043
Protein molecular weight: 35219.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00602
Location and strand information: 143580 - 146897 (+)
Family: GH143|GH142
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0444
Protein molecular weight: 126610.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00603
Location and strand information: 146907 - 149693 (+)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6958
Protein molecular weight: 103729.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00604
Location and strand information: 149690 - 151021 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.0814
Protein molecular weight: 49201.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00605
Location and strand information: 151018 - 152994 (+)
Family: CE0|CE19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.0117
Protein molecular weight: 73126.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00606
Location and strand information: 153138 - 155591 (+)
Family: CBM13|GH95|CBM2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8329
Protein molecular weight: 91431.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00607
Location and strand information: 155619 - 157088 (+)
Family: GH140
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8985
Protein molecular weight: 56508.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00608
Location and strand information: 157101 - 160883 (+)
Family: GH78|CBM67|GH33
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3278
Protein molecular weight: 142037.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00609
Location and strand information: 160907 - 162991 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 7.0499
Protein molecular weight: 78203.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00610
Location and strand information: 163014 - 164894 (+)
Family: GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0966
Protein molecular weight: 69771.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC1
Gene ID: MGYG000003064_00611
Location and strand information: 164917 - 167103 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1045
Protein molecular weight: 83098.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003064_00592	GT51_e87
MGYG000003064_00599	PL1_e27
MGYG000003064_00601	GH43_e130\|3.2.1.55	xylan
MGYG000003064_00602	GH143_e0\|GH142_e0
MGYG000003064_00603	GH78_e41\|3.2.1.40	alpha-rhamnoside
MGYG000003064_00604	GH28_e11
MGYG000003064_00605	CE0_e11
MGYG000003064_00606	GH95_e0\|CBM2_e92\|CBM13_e181\|3.2.1.-	xylan\|pectin
MGYG000003064_00607	GH140_e1\|3.2.1.-	pectin
MGYG000003064_00608	GH78_e32\|GH33_e8\|CBM67_e6\|3.2.1.40\|3.2.1.-	pectin\|alpha-rhamnoside
MGYG000003064_00609	GH127_e2\|3.2.1.-	carrageenan
MGYG000003064_00610	GH141_e0\|3.2.1.51	pectin
MGYG000003064_00611	GH78_e26\|3.2.1.40	alpha-rhamnoside

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003064_00587	hypothetical protein	TC	121326	123902	-	1.B.14.6.14
MGYG000003064_00588	UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase	null	124088	125173	-	Epimerase_2
MGYG000003064_00589	hypothetical protein	TC	125259	125876	+	1.A.62.2.1
MGYG000003064_00590	ECF RNA polymerase sigma factor SigH	STP	126072	126575	+	Sigma70_r2\| Sigma70_r4_2
MGYG000003064_00591	hypothetical protein	TC	126862	128637	+	3.B.1.1.6
MGYG000003064_00592	Biosynthetic peptidoglycan transglycosylase	CAZyme	128724	129410	-	GT51
MGYG000003064_00593	putative lipoprotein YiaD	TC	129528	130199	-	9.B.186.1.3
MGYG000003064_00594	hypothetical protein	TC	130323	131675	-	2.A.66.1.2
MGYG000003064_00595	hypothetical protein	null	131869	132756	+	AP_endonuc_2
MGYG000003064_00596	hypothetical protein	null	132815	134305	+	DUF4992\| DUF4957
MGYG000003064_00597	hypothetical protein	TC	134338	137670	+	1.B.14.6.1
MGYG000003064_00598	hypothetical protein	null	137683	139866	+	SusD-like_3\| SusD_RagB
MGYG000003064_00599	hypothetical protein	CAZyme	140067	141755	+	PL1\| PL1_2
MGYG000003064_00600	hypothetical protein	null	141767	142444	+	DUF3826
MGYG000003064_00601	hypothetical protein	CAZyme	142635	143558	+	GH43_18\| GH43\| 3.2.1.55
MGYG000003064_00602	hypothetical protein	CAZyme	143580	146897	+	GH143\| GH142
MGYG000003064_00603	hypothetical protein	CAZyme	146907	149693	+	GH78\| CBM67
MGYG000003064_00604	hypothetical protein	CAZyme	149690	151021	+	GH28
MGYG000003064_00605	hypothetical protein	CAZyme	151018	152994	+	CE0\| CE19
MGYG000003064_00606	hypothetical protein	CAZyme	153138	155591	+	CBM13\| GH95\| CBM2
MGYG000003064_00607	hypothetical protein	CAZyme	155619	157088	+	GH140
MGYG000003064_00608	hypothetical protein	CAZyme	157101	160883	+	GH78\| CBM67\| GH33
MGYG000003064_00609	Non-reducing end beta-L-arabinofuranosidase	CAZyme	160907	162991	+	GH127
MGYG000003064_00610	hypothetical protein	CAZyme	163014	164894	+	GH141
MGYG000003064_00611	hypothetical protein	CAZyme	164917	167103	+	GH78
Protein ID	Protein Name	Type	Start	End	Strand	Signature