dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04095
Location and strand information: 58387 - 59343 (+)
Family: 3.A.1.1.41
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04096
Location and strand information: 59346 - 60221 (+)
Family: 3.A.1.1.39
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04097
Location and strand information: 60237 - 61700 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04098
Location and strand information: 61684 - 62319 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04099
Location and strand information: 62337 - 64913 (+)
Family: GH0|GH129
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.598
Protein molecular weight: 94577.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04100
Location and strand information: 64967 - 65812 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04101
Location and strand information: 65830 - 66777 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04102
Location and strand information: 66836 - 67057 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04103
Location and strand information: 67054 - 68760 (+)
Family: GH5|CBM13|GH5_35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1868
Protein molecular weight: 62656.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04104
Location and strand information: 69055 - 71406 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04105
Location and strand information: 71562 - 72536 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04106
Location and strand information: 72564 - 73493 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04107
Location and strand information: 73532 - 75172 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04108
Location and strand information: 75397 - 76539 (-)
Family: GH8
Protein type: CAZyme
Protein description: Reducing end xylose-releasing exo-oligoxylanase
Protein isoelectric point: 4.9217
Protein molecular weight: 44463.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04109
Location and strand information: 76828 - 78111 (+)
Family: CE17
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4237
Protein molecular weight: 47798.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04110
Location and strand information: 78153 - 78926 (+)
Family: CE0|CE1|GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase Z
Protein isoelectric point: 5.1033
Protein molecular weight: 28917.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04111
Location and strand information: 78998 - 79633 (+)
Family: GH11|CBM2
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 9.5289
Protein molecular weight: 23140.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04112
Location and strand information: 79767 - 80606 (+)
Family: 9.A.25.1.1
Protein type: TC
Protein description: Serine/threonine-protein kinase pkn1

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04113
Location and strand information: 80957 - 82072 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04114
Location and strand information: 82077 - 83858 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04115
Location and strand information: 83872 - 85413 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04116
Location and strand information: 85553 - 87208 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04117
Location and strand information: 87321 - 88286 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000003072_19|CGC3
Gene ID: MGYG000003072_04118
Location and strand information: 88299 - 89201 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is cellulose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003072_04095	L-arabinose transport system permease protein AraP	TC	58387	59343	+	3.A.1.1.41
MGYG000003072_04096	hypothetical protein	TC	59346	60221	+	3.A.1.1.39
MGYG000003072_04097	hypothetical protein	null	60237	61700	+	NHL
MGYG000003072_04098	hypothetical protein	null	61684	62319	+	Yip1
MGYG000003072_04099	hypothetical protein	CAZyme	62337	64913	+	GH0\| GH129
MGYG000003072_04100	Lactose transport system permease protein LacF	TC	64967	65812	+	3.A.1.1.45
MGYG000003072_04101	L-arabinose transport system permease protein AraQ	TC	65830	66777	+	3.A.1.1.36
MGYG000003072_04102	hypothetical protein	null	66836	67057	+	No domain
MGYG000003072_04103	hypothetical protein	CAZyme	67054	68760	+	GH5\| CBM13\| GH5_35
MGYG000003072_04104	HTH-type transcriptional activator RhaR	TF	69055	71406	+	HTH_AraC
MGYG000003072_04105	putative multiple-sugar transport system permease YteP	TC	71562	72536	+	3.A.1.1.10
MGYG000003072_04106	L-arabinose transport system permease protein AraQ	TC	72564	73493	+	3.A.1.1.10
MGYG000003072_04107	hypothetical protein	TC	73532	75172	+	3.A.1.1.10
MGYG000003072_04108	Reducing end xylose-releasing exo-oligoxylanase	CAZyme	75397	76539	-	GH8
MGYG000003072_04109	hypothetical protein	CAZyme	76828	78111	+	CE17
MGYG000003072_04110	Endo-1,4-beta-xylanase Z	CAZyme	78153	78926	+	CE0\| CE1\| GH10
MGYG000003072_04111	Endo-1,4-beta-xylanase A	CAZyme	78998	79633	+	GH11\| CBM2
MGYG000003072_04112	Serine/threonine-protein kinase pkn1	TC	79767	80606	+	9.A.25.1.1
MGYG000003072_04113	HTH-type transcriptional activator RhaR	TF	80957	82072	+	HTH_AraC+HTH_AraC
MGYG000003072_04114	hypothetical protein	TC	82077	83858	+	8.A.59.2.1
MGYG000003072_04115	Chemotaxis response regulator protein-glutamate methylesterase	TF	83872	85413	+	HTH_AraC
MGYG000003072_04116	hypothetical protein	TC	85553	87208	+	3.A.1.1.29
MGYG000003072_04117	putative multiple-sugar transport system permease YteP	TC	87321	88286	+	3.A.1.1.29
MGYG000003072_04118	L-arabinose transport system permease protein AraQ	TC	88299	89201	+	3.A.1.1.29
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003072_04099
MGYG000003072_04103	GH5_e160\|CBM13_e169
MGYG000003072_04108	GH8_e30\|3.2.1.8\|3.2.1.156	xylan
MGYG000003072_04109
MGYG000003072_04110	GH10_e53\|CE1_e55\|3.1.1.73	xylan
MGYG000003072_04111	GH11_e1\|CBM2_e76\|3.2.1.8\|3.1.1.72\|3.1.1.6	xylan