dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01396
Location and strand information: 10142 - 11194 (-)
Family: GT113
Protein type: CAZyme
Protein description: Beta-1,6-galactofuranosyltransferase WbbI
Protein isoelectric point: 7.3284
Protein molecular weight: 39586.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01397
Location and strand information: 11222 - 12325 (-)
Family: Pyr_redox
Protein type: STP
Protein description: UDP-galactopyranose mutase

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01398
Location and strand information: 12335 - 13747 (-)
Family: 2.A.66.2.16
Protein type: TC
Protein description: Putative O-antigen transporter

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01399
Location and strand information: 13744 - 14904 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01400
Location and strand information: 14943 - 15908 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7757
Protein molecular weight: 37177.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01401
Location and strand information: 15943 - 16941 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01402
Location and strand information: 16944 - 18101 (-)
Family: GT4
Protein type: CAZyme
Protein description: D-inositol-3-phosphate glycosyltransferase
Protein isoelectric point: 6.9175
Protein molecular weight: 43536.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01403
Location and strand information: 18105 - 19277 (-)
Family: GT4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3923
Protein molecular weight: 44706.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01404
Location and strand information: 19308 - 20675 (-)
Family: 9.B.18.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01405
Location and strand information: 20698 - 21390 (-)
Family: 8.A.3.2.2
Protein type: TC
Protein description: Tyrosine-protein kinase CpsD

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01406
Location and strand information: 21400 - 22092 (-)
Family: 8.A.3.2.3
Protein type: TC
Protein description: Capsular polysaccharide type 8 biosynthesis protein cap8A

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01407
Location and strand information: 22101 - 22832 (-)
Family: null
Protein type: null
Protein description: Tyrosine-protein phosphatase CpsB

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01408
Location and strand information: 22834 - 24279 (-)
Family: null
Protein type: null
Protein description: Transcriptional regulator LytR

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01409
Location and strand information: 24473 - 26431 (-)
Family: 3.A.1.5.19
Protein type: TC
Protein description: Oligopeptide-binding protein SarA

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01410
Location and strand information: 26587 - 28554 (-)
Family: 3.A.1.5.25
Protein type: TC
Protein description: Oligopeptide-binding protein AmiA

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01411
Location and strand information: 28724 - 30334 (-)
Family: GH13_31|GH13
Protein type: CAZyme
Protein description: Glucan 1,6-alpha-glucosidase
Protein isoelectric point: 4.4425
Protein molecular weight: 62302.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01412
Location and strand information: 30487 - 31971 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01413
Location and strand information: 32066 - 32548 (+)
Family: null
Protein type: null
Protein description: S-ribosylhomocysteine lyase

Gene clsuter ID: MGYG000003146_13|CGC1
Gene ID: MGYG000003146_01414
Location and strand information: 32714 - 34819 (-)
Family: 3.A.9.1.2
Protein type: TC
Protein description: putative ATP-dependent Clp protease ATP-binding subunit

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003146_01396	Beta-1,6-galactofuranosyltransferase WbbI	CAZyme	10142	11194	-	GT113
MGYG000003146_01397	UDP-galactopyranose mutase	STP	11222	12325	-	Pyr_redox
MGYG000003146_01398	Putative O-antigen transporter	TC	12335	13747	-	2.A.66.2.16
MGYG000003146_01399	hypothetical protein	null	13744	14904	-	No domain
MGYG000003146_01400	hypothetical protein	CAZyme	14943	15908	-	GT2
MGYG000003146_01401	hypothetical protein	null	15943	16941	-	Stealth_CR1\| Stealth_CR2\| Stealth_CR3
MGYG000003146_01402	D-inositol-3-phosphate glycosyltransferase	CAZyme	16944	18101	-	GT4
MGYG000003146_01403	hypothetical protein	CAZyme	18105	19277	-	GT4
MGYG000003146_01404	hypothetical protein	TC	19308	20675	-	9.B.18.1.2
MGYG000003146_01405	Tyrosine-protein kinase CpsD	TC	20698	21390	-	8.A.3.2.2
MGYG000003146_01406	Capsular polysaccharide type 8 biosynthesis protein cap8A	TC	21400	22092	-	8.A.3.2.3
MGYG000003146_01407	Tyrosine-protein phosphatase CpsB	null	22101	22832	-	CpsB_CapC
MGYG000003146_01408	Transcriptional regulator LytR	null	22834	24279	-	DNA_PPF\| LytR_cpsA_psr
MGYG000003146_01409	Oligopeptide-binding protein SarA	TC	24473	26431	-	3.A.1.5.19
MGYG000003146_01410	Oligopeptide-binding protein AmiA	TC	26587	28554	-	3.A.1.5.25
MGYG000003146_01411	Glucan 1,6-alpha-glucosidase	CAZyme	28724	30334	-	GH13_31\| GH13
MGYG000003146_01412	hypothetical protein	null	30487	31971	+	DUF1846
MGYG000003146_01413	S-ribosylhomocysteine lyase	null	32066	32548	+	LuxS
MGYG000003146_01414	putative ATP-dependent Clp protease ATP-binding subunit	TC	32714	34819	-	3.A.9.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature