dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00183
Location and strand information: 223057 - 224112 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: Twitching mobility protein

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00184
Location and strand information: 224202 - 225002 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00185
Location and strand information: 225139 - 226461 (+)
Family: GH4
Protein type: CAZyme
Protein description: Alpha-galactosidase
Protein isoelectric point: 4.8565
Protein molecular weight: 49589.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00186
Location and strand information: 226596 - 226814 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00187
Location and strand information: 227342 - 228253 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Arabinose operon regulatory protein

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00188
Location and strand information: 228320 - 229150 (-)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00189
Location and strand information: 229165 - 230061 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00190
Location and strand information: 230224 - 231588 (-)
Family: 3.A.1.1.44
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00191
Location and strand information: 232396 - 233052 (+)
Family: 9.B.28.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00192
Location and strand information: 233155 - 235347 (-)
Family: GH36
Protein type: CAZyme
Protein description: Bifunctional alpha-galactosidase/sucrose kinase AgaSK
Protein isoelectric point: 4.8108
Protein molecular weight: 82856.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00193
Location and strand information: 235868 - 237226 (+)
Family: Citrate_synt
Protein type: STP
Protein description: Citrate synthase

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00194
Location and strand information: 237228 - 237689 (+)
Family: MarR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00195
Location and strand information: 237946 - 238584 (-)
Family: 2.A.115.2.14
Protein type: TC
Protein description: Cytidylate kinase

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00196
Location and strand information: 238603 - 239313 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport ATP-binding protein LivF

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00197
Location and strand information: 239324 - 240082 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00198
Location and strand information: 240085 - 241056 (-)
Family: 3.A.1.4.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00199
Location and strand information: 241065 - 241952 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport system permease protein LivH

Gene clsuter ID: MGYG000003147_1|CGC6
Gene ID: MGYG000003147_00200
Location and strand information: 242324 - 243568 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is raffinose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003147_00183	Twitching mobility protein	TC	223057	224112	+	3.A.15.2.1
MGYG000003147_00184	HTH-type transcriptional activator RhaS	TF	224202	225002	-	HTH_AraC+HTH_AraC
MGYG000003147_00185	Alpha-galactosidase	CAZyme	225139	226461	+	GH4
MGYG000003147_00186	hypothetical protein	null	226596	226814	-	No domain
MGYG000003147_00187	Arabinose operon regulatory protein	TF	227342	228253	+	HTH_AraC+HTH_AraC
MGYG000003147_00188	L-arabinose transport system permease protein AraQ	TC	228320	229150	-	3.A.1.1.36
MGYG000003147_00189	Lactose transport system permease protein LacF	TC	229165	230061	-	3.A.1.1.20
MGYG000003147_00190	hypothetical protein	TC	230224	231588	-	3.A.1.1.44
MGYG000003147_00191	hypothetical protein	TC	232396	233052	+	9.B.28.1.3
MGYG000003147_00192	Bifunctional alpha-galactosidase/sucrose kinase AgaSK	CAZyme	233155	235347	-	GH36
MGYG000003147_00193	Citrate synthase	STP	235868	237226	+	Citrate_synt
MGYG000003147_00194	hypothetical protein	TF	237228	237689	+	MarR
MGYG000003147_00195	Cytidylate kinase	TC	237946	238584	-	2.A.115.2.14
MGYG000003147_00196	High-affinity branched-chain amino acid transport ATP-binding protein LivF	TC	238603	239313	-	3.A.1.4.10
MGYG000003147_00197	Lipopolysaccharide export system ATP-binding protein LptB	TC	239324	240082	-	3.A.1.4.10
MGYG000003147_00198	hypothetical protein	TC	240085	241056	-	3.A.1.4.8
MGYG000003147_00199	High-affinity branched-chain amino acid transport system permease protein LivH	TC	241065	241952	-	3.A.1.4.10
MGYG000003147_00200	hypothetical protein	TC	242324	243568	-	3.A.1.4.10
Protein ID	Protein Name	Type	Start	End	Strand	Signature