dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003192_53|CGC1
Gene ID: MGYG000003192_02304
Location and strand information: 2967 - 3311 (+)
Family: 2.A.7.33.5
Protein type: TC
Protein description: 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE

Gene clsuter ID: MGYG000003192_53|CGC1
Gene ID: MGYG000003192_02305
Location and strand information: 4130 - 5077 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 5.8708
Protein molecular weight: 35938.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003192_53|CGC1
Gene ID: MGYG000003192_02306
Location and strand information: 5144 - 6280 (+)
Family: Aminotran_1_2
Protein type: STP
Protein description: dTDP-4-amino-4,6-dideoxygalactose transaminase

Gene clsuter ID: MGYG000003192_53|CGC1
Gene ID: MGYG000003192_02307
Location and strand information: 6290 - 8107 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6335
Protein molecular weight: 69968.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003192_53|CGC1
Gene ID: MGYG000003192_02308
Location and strand information: 8120 - 9085 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.0417
Protein molecular weight: 36850.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003192_53|CGC1
Gene ID: MGYG000003192_02309
Location and strand information: 9243 - 10649 (+)
Family: 9.B.18.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003192_53|CGC1
Gene ID: MGYG000003192_02310
Location and strand information: 10669 - 11871 (+)
Family: null
Protein type: null
Protein description: Transcriptional regulator LytR

Gene clsuter ID: MGYG000003192_53|CGC1
Gene ID: MGYG000003192_02311
Location and strand information: 11868 - 12818 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7455
Protein molecular weight: 36330.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003192_02304	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE	TC	2967	3311	+	2.A.7.33.5
MGYG000003192_02305	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	4130	5077	+	GT2
MGYG000003192_02306	dTDP-4-amino-4,6-dideoxygalactose transaminase	STP	5144	6280	+	Aminotran_1_2
MGYG000003192_02307	hypothetical protein	CAZyme	6290	8107	+	GT2
MGYG000003192_02308	hypothetical protein	CAZyme	8120	9085	+	GT2
MGYG000003192_02309	hypothetical protein	TC	9243	10649	+	9.B.18.1.1
MGYG000003192_02310	Transcriptional regulator LytR	null	10669	11871	+	LytR_cpsA_psr
MGYG000003192_02311	hypothetical protein	CAZyme	11868	12818	+	GT2
Protein ID	Protein Name	Type	Start	End	Strand	Signature