dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01464
Location and strand information: 35274 - 37169 (+)
Family: 2.A.21.9.2
Protein type: TC
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01465
Location and strand information: 37475 - 38050 (-)
Family: GerE
Protein type: TF
Protein description: ECF RNA polymerase sigma-E factor

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01466
Location and strand information: 38186 - 39208 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01467
Location and strand information: 39381 - 42776 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01468
Location and strand information: 42794 - 44341 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01469
Location and strand information: 44502 - 44636 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01470
Location and strand information: 44663 - 46981 (+)
Family: GH35|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5573
Protein molecular weight: 87354.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01471
Location and strand information: 47055 - 49259 (+)
Family: GH89
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0285
Protein molecular weight: 83682.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01472
Location and strand information: 49377 - 49823 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01473
Location and strand information: 49885 - 50991 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003312_42|CGC1
Gene ID: MGYG000003312_01474
Location and strand information: 51144 - 54461 (-)
Family: 3.A.5.1.1
Protein type: TC
Protein description: Protein translocase subunit SecA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is mucin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003312_01464	Sensor histidine kinase RcsC	TC	35274	37169	+	2.A.21.9.2
MGYG000003312_01465	ECF RNA polymerase sigma-E factor	TF	37475	38050	-	GerE
MGYG000003312_01466	hypothetical protein	STP	38186	39208	+	FecR
MGYG000003312_01467	TonB-dependent receptor SusC	TC	39381	42776	+	1.B.14.6.1
MGYG000003312_01468	hypothetical protein	null	42794	44341	+	SusD_RagB
MGYG000003312_01469	hypothetical protein	null	44502	44636	+	No domain
MGYG000003312_01470	hypothetical protein	CAZyme	44663	46981	+	GH35\| CBM32
MGYG000003312_01471	hypothetical protein	CAZyme	47055	49259	+	GH89
MGYG000003312_01472	hypothetical protein	null	49377	49823	-	No domain
MGYG000003312_01473	hypothetical protein	null	49885	50991	-	DUF6340
MGYG000003312_01474	Protein translocase subunit SecA	TC	51144	54461	-	3.A.5.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature