dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00631
Location and strand information: 39152 - 40330 (-)
Family: PL13
Protein type: CAZyme
Protein description: Heparin lyase I
Protein isoelectric point: 9.1047
Protein molecular weight: 44356.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00632
Location and strand information: 40454 - 41005 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00633
Location and strand information: 41257 - 43698 (+)
Family: CBM67|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.9284
Protein molecular weight: 91801.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00634
Location and strand information: 43790 - 44476 (-)
Family: null
Protein type: null
Protein description: Ktr system potassium uptake protein A

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00635
Location and strand information: 44481 - 46310 (-)
Family: 2.A.38.4.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00636
Location and strand information: 46444 - 47814 (+)
Family: PALP
Protein type: STP
Protein description: Tryptophan synthase beta chain

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00637
Location and strand information: 47949 - 52010 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00638
Location and strand information: 52602 - 54737 (+)
Family: PL12_2
Protein type: CAZyme
Protein description: Heparin-sulfate lyase
Protein isoelectric point: 5.8513
Protein molecular weight: 82474.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00639
Location and strand information: 54753 - 57014 (+)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4448
Protein molecular weight: 86040.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00640
Location and strand information: 57026 - 57133 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00641
Location and strand information: 57265 - 59361 (+)
Family: PL12_2|PL12
Protein type: CAZyme
Protein description: Heparin-sulfate lyase
Protein isoelectric point: 5.3351
Protein molecular weight: 80743.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00642
Location and strand information: 59394 - 61673 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00643
Location and strand information: 61680 - 64838 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00644
Location and strand information: 64853 - 66553 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00645
Location and strand information: 66741 - 68027 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 5.4724
Protein molecular weight: 48269.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003351_87|CGC3
Gene ID: MGYG000003351_00646
Location and strand information: 68056 - 70056 (+)
Family: PL12_2|PL12
Protein type: CAZyme
Protein description: Heparin-sulfate lyase
Protein isoelectric point: 9.1189
Protein molecular weight: 77223.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003351_00631	PL13_e0\|4.2.2.7	hostglycan
MGYG000003351_00633	GH2_e59\|CBM67_e9\|3.2.1.23	beta-galactan
MGYG000003351_00638
MGYG000003351_00639	GH95_e5
MGYG000003351_00641	PL12_e10\|4.2.2.8	hostglycan
MGYG000003351_00645	GH88_e23\|3.2.1.-	hostglycan
MGYG000003351_00646	PL12_e10\|4.2.2.8	hostglycan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is glycosaminoglycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003351_00631	Heparin lyase I	CAZyme	39152	40330	-	PL13
MGYG000003351_00632	hypothetical protein	null	40454	41005	-	DUF4738
MGYG000003351_00633	Beta-galactosidase BoGH2A	CAZyme	41257	43698	+	CBM67\| GH2
MGYG000003351_00634	Ktr system potassium uptake protein A	null	43790	44476	-	TrkA_N
MGYG000003351_00635	hypothetical protein	TC	44481	46310	-	2.A.38.4.3
MGYG000003351_00636	Tryptophan synthase beta chain	STP	46444	47814	+	PALP
MGYG000003351_00637	Sensor histidine kinase RcsC	TF	47949	52010	+	HTH_AraC
MGYG000003351_00638	Heparin-sulfate lyase	CAZyme	52602	54737	+	PL12_2
MGYG000003351_00639	hypothetical protein	CAZyme	54753	57014	+	GH95
MGYG000003351_00640	hypothetical protein	null	57026	57133	+	No domain
MGYG000003351_00641	Heparin-sulfate lyase	CAZyme	57265	59361	+	PL12_2\| PL12
MGYG000003351_00642	hypothetical protein	null	59394	61673	+	DUF4958
MGYG000003351_00643	TonB-dependent receptor SusC	TC	61680	64838	+	1.B.14.6.1
MGYG000003351_00644	hypothetical protein	TC	64853	66553	+	8.A.46.1.3
MGYG000003351_00645	Unsaturated chondroitin disaccharide hydrolase	CAZyme	66741	68027	+	GH88
MGYG000003351_00646	Heparin-sulfate lyase	CAZyme	68056	70056	+	PL12_2\| PL12
Protein ID	Protein Name	Type	Start	End	Strand	Signature