dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02729
Location and strand information: 18210 - 19475 (+)
Family: 1.B.3.1.1
Protein type: TC
Protein description: Maltoporin

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02730
Location and strand information: 19714 - 20031 (-)
Family: 4.A.1.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02731
Location and strand information: 20101 - 22158 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BglY
Protein isoelectric point: 6.0184
Protein molecular weight: 77369.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02732
Location and strand information: 22187 - 23389 (-)
Family: CBM61|GH53
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 6.3986
Protein molecular weight: 44809.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02733
Location and strand information: 23394 - 24245 (-)
Family: 3.A.1.1.2
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02734
Location and strand information: 24255 - 25562 (-)
Family: 3.A.1.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02735
Location and strand information: 25616 - 26848 (-)
Family: 3.A.1.1.2
Protein type: TC
Protein description: Cyclodextrin-binding protein

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02736
Location and strand information: 27194 - 28303 (+)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Maltose/maltodextrin import ATP-binding protein MalK

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02737
Location and strand information: 28534 - 29565 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02738
Location and strand information: 29591 - 30397 (+)
Family: 3.A.1.24.5
Protein type: TC
Protein description: D-methionine-binding lipoprotein MetQ

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02739
Location and strand information: 30394 - 31185 (+)
Family: 3.A.1.24.1
Protein type: TC
Protein description: Methionine import ATP-binding protein MetN

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02740
Location and strand information: 31170 - 31841 (+)
Family: 3.A.1.24.5
Protein type: TC
Protein description: D-methionine transport system permease protein MetI

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02741
Location and strand information: 31937 - 33502 (+)
Family: EAL
Protein type: STP
Protein description: putative cyclic di-GMP phosphodiesterase PdeB

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02742
Location and strand information: 33495 - 33767 (-)
Family: null
Protein type: null
Protein description: Transcriptional repressor RcnR

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02743
Location and strand information: 33902 - 34750 (+)
Family: 2.A.113.1.1
Protein type: TC
Protein description: Nickel/cobalt efflux system RcnA

Gene clsuter ID: MGYG000003358_123|CGC1
Gene ID: MGYG000003358_02744
Location and strand information: 34813 - 35409 (-)
Family: 2.A.115.2.6
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003358_02731	GH42_e16\|3.2.1.23	arabinogalactan
MGYG000003358_02732	GH53_e1\|CBM61_e2\|3.2.1.89	arabinogalactan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinogalactan

Substrate predicted by dbCAN-PUL is beta-galactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003358_02729	Maltoporin	TC	18210	19475	+	1.B.3.1.1
MGYG000003358_02730	hypothetical protein	TC	19714	20031	-	4.A.1.1.1
MGYG000003358_02731	Beta-galactosidase BglY	CAZyme	20101	22158	-	GH42
MGYG000003358_02732	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	22187	23389	-	CBM61\| GH53
MGYG000003358_02733	L-arabinose transport system permease protein AraQ	TC	23394	24245	-	3.A.1.1.2
MGYG000003358_02734	hypothetical protein	TC	24255	25562	-	3.A.1.1.2
MGYG000003358_02735	Cyclodextrin-binding protein	TC	25616	26848	-	3.A.1.1.2
MGYG000003358_02736	Maltose/maltodextrin import ATP-binding protein MalK	TC	27194	28303	+	3.A.1.1.4
MGYG000003358_02737	hypothetical protein	null	28534	29565	+	DIOX_N\| 2OG-FeII_Oxy
MGYG000003358_02738	D-methionine-binding lipoprotein MetQ	TC	29591	30397	+	3.A.1.24.5
MGYG000003358_02739	Methionine import ATP-binding protein MetN	TC	30394	31185	+	3.A.1.24.1
MGYG000003358_02740	D-methionine transport system permease protein MetI	TC	31170	31841	+	3.A.1.24.5
MGYG000003358_02741	putative cyclic di-GMP phosphodiesterase PdeB	STP	31937	33502	+	EAL
MGYG000003358_02742	Transcriptional repressor RcnR	null	33495	33767	-	Trns_repr_metal
MGYG000003358_02743	Nickel/cobalt efflux system RcnA	TC	33902	34750	+	2.A.113.1.1
MGYG000003358_02744	hypothetical protein	TC	34813	35409	-	2.A.115.2.6
Protein ID	Protein Name	Type	Start	End	Strand	Signature