dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02611
Location and strand information: 224054 - 227413 (+)
Family: 1.B.14.6.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02612
Location and strand information: 227433 - 228962 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02613
Location and strand information: 229184 - 229993 (+)
Family: GH16|GH16_3
Protein type: CAZyme
Protein description: Beta-glucanase
Protein isoelectric point: 7.0698
Protein molecular weight: 30886.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02614
Location and strand information: 230024 - 230569 (+)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02615
Location and strand information: 230594 - 231688 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02616
Location and strand information: 231781 - 233871 (-)
Family: GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.0436
Protein molecular weight: 79601.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02617
Location and strand information: 234036 - 236111 (-)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 6.5537
Protein molecular weight: 80069.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02618
Location and strand information: 236169 - 237290 (-)
Family: 2.A.1.7.17
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02619
Location and strand information: 237404 - 239089 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02620
Location and strand information: 239112 - 240692 (-)
Family: GH30|GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1696
Protein molecular weight: 59708.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02621
Location and strand information: 240718 - 241296 (-)
Family: SIS
Protein type: STP
Protein description: Phosphoheptose isomerase

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02622
Location and strand information: 241307 - 242278 (-)
Family: null
Protein type: null
Protein description: Glucokinase

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02623
Location and strand information: 242283 - 244685 (-)
Family: GH2
Protein type: CAZyme
Protein description: Exo-beta-D-glucosaminidase
Protein isoelectric point: 6.5666
Protein molecular weight: 91878.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02624
Location and strand information: 244700 - 246382 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02625
Location and strand information: 246397 - 249543 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02626
Location and strand information: 249661 - 252312 (-)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8892
Protein molecular weight: 100513.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02627
Location and strand information: 253194 - 254216 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator DegA

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02628
Location and strand information: 254628 - 255311 (+)
Family: null
Protein type: null
Protein description: L-ribulose-5-phosphate 4-epimerase UlaF

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02629
Location and strand information: 255341 - 256876 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 6.7665
Protein molecular weight: 57670.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02630
Location and strand information: 256902 - 258404 (+)
Family: null
Protein type: null
Protein description: L-arabinose isomerase

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02631
Location and strand information: 258553 - 260220 (+)
Family: null
Protein type: null
Protein description: Ribulokinase

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02632
Location and strand information: 260236 - 261981 (+)
Family: 2.A.21.3.19
Protein type: TC
Protein description: Sodium/glucose cotransporter

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02633
Location and strand information: 262449 - 264665 (-)
Family: GH10|CBM4|3.2.1.8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6033
Protein molecular weight: 82812.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02634
Location and strand information: 264687 - 265727 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02635
Location and strand information: 265763 - 267568 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02636
Location and strand information: 267583 - 270420 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02637
Location and strand information: 270464 - 272407 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02638
Location and strand information: 272419 - 275562 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02639
Location and strand information: 276107 - 277831 (-)
Family: GH43_12|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 7.1051
Protein molecular weight: 64347.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02640
Location and strand information: 278111 - 279082 (-)
Family: GH43_1|GH43
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.6799
Protein molecular weight: 36748.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003362_16|CGC6
Gene ID: MGYG000003362_02641
Location and strand information: 279114 - 280256 (-)
Family: GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 5.203
Protein molecular weight: 43411.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003362_02613	GH16_e207\|3.2.1.73\|3.2.1.39	beta-glucan
MGYG000003362_02616	GH36_e38
MGYG000003362_02617	GH36_e38
MGYG000003362_02620	GH36_e38
MGYG000003362_02623	GH2_e34
MGYG000003362_02626	GH78_e40
MGYG000003362_02629	GH51_e14\|3.2.1.55	arabinan
MGYG000003362_02633	GH10_e9\|CBM4_e10\|3.2.1.8	xylan
MGYG000003362_02639	GH43_e65\|3.2.1.8\|3.2.1.55	xylan
MGYG000003362_02640	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000003362_02641	GH10_e55\|3.2.1.8\|3.2.1.55	xylan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003362_02611	hypothetical protein	TC	224054	227413	+	1.B.14.6.2
MGYG000003362_02612	hypothetical protein	null	227433	228962	+	SusD-like_2
MGYG000003362_02613	Beta-glucanase	CAZyme	229184	229993	+	GH16\| GH16_3
MGYG000003362_02614	hypothetical protein	TF	230024	230569	+	GerE
MGYG000003362_02615	hypothetical protein	null	230594	231688	-	Exo_endo_phos
MGYG000003362_02616	hypothetical protein	CAZyme	231781	233871	-	GH36
MGYG000003362_02617	Alpha-galactosidase AgaA	CAZyme	234036	236111	-	GH36
MGYG000003362_02618	hypothetical protein	TC	236169	237290	-	2.A.1.7.17
MGYG000003362_02619	hypothetical protein	null	237404	239089	-	No domain
MGYG000003362_02620	hypothetical protein	CAZyme	239112	240692	-	GH30\| GH36
MGYG000003362_02621	Phosphoheptose isomerase	STP	240718	241296	-	SIS
MGYG000003362_02622	Glucokinase	null	241307	242278	-	ROK
MGYG000003362_02623	Exo-beta-D-glucosaminidase	CAZyme	242283	244685	-	GH2
MGYG000003362_02624	hypothetical protein	null	244700	246382	-	SusD-like_3\| SusD_RagB
MGYG000003362_02625	TonB-dependent receptor SusC	TC	246397	249543	-	1.B.14.6.1
MGYG000003362_02626	hypothetical protein	CAZyme	249661	252312	-	CBM67\| GH78
MGYG000003362_02627	HTH-type transcriptional regulator DegA	TF	253194	254216	+	LacI
MGYG000003362_02628	L-ribulose-5-phosphate 4-epimerase UlaF	null	254628	255311	+	Aldolase_II
MGYG000003362_02629	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	255341	256876	+	GH51
MGYG000003362_02630	L-arabinose isomerase	null	256902	258404	+	Arabinose_Isome\| Arabinose_Iso_C
MGYG000003362_02631	Ribulokinase	null	258553	260220	+	FGGY_N\| FGGY_C
MGYG000003362_02632	Sodium/glucose cotransporter	TC	260236	261981	+	2.A.21.3.19
MGYG000003362_02633	hypothetical protein	CAZyme	262449	264665	-	GH10\| CBM4\| 3.2.1.8
MGYG000003362_02634	hypothetical protein	null	264687	265727	-	DUF1735\| DUF5627
MGYG000003362_02635	hypothetical protein	null	265763	267568	-	SusD-like_3\| SusD_RagB
MGYG000003362_02636	hypothetical protein	TC	267583	270420	-	1.B.14.6.1
MGYG000003362_02637	hypothetical protein	null	270464	272407	-	SusD-like_3\| SusD_RagB
MGYG000003362_02638	TonB-dependent receptor SusC	TC	272419	275562	-	1.B.14.6.1
MGYG000003362_02639	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	276107	277831	-	GH43_12\| GH43
MGYG000003362_02640	Xylosidase/arabinosidase	CAZyme	278111	279082	-	GH43_1\| GH43
MGYG000003362_02641	Endo-1,4-beta-xylanase A	CAZyme	279114	280256	-	GH10
Protein ID	Protein Name	Type	Start	End	Strand	Signature