dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00601
Location and strand information: 2584 - 4194 (+)
Family: GH13|GH13_31
Protein type: CAZyme
Protein description: Glucan 1,6-alpha-glucosidase
Protein isoelectric point: 4.3229
Protein molecular weight: 62204.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00602
Location and strand information: 4362 - 6329 (+)
Family: 3.A.1.5.25
Protein type: TC
Protein description: Oligopeptide-binding protein SarA

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00603
Location and strand information: 6531 - 8489 (+)
Family: 3.A.1.5.19
Protein type: TC
Protein description: Oligopeptide-binding protein SarA

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00604
Location and strand information: 8679 - 10124 (+)
Family: null
Protein type: null
Protein description: Transcriptional regulator LytR

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00605
Location and strand information: 10131 - 10862 (+)
Family: null
Protein type: null
Protein description: Tyrosine-protein phosphatase CpsB

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00606
Location and strand information: 10871 - 11563 (+)
Family: 8.A.3.2.3
Protein type: TC
Protein description: putative capsular polysaccharide biosynthesis protein YwqC

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00607
Location and strand information: 11574 - 12275 (+)
Family: 8.A.3.2.2
Protein type: TC
Protein description: Tyrosine-protein kinase CpsD

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00608
Location and strand information: 12297 - 13664 (+)
Family: 9.B.18.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00609
Location and strand information: 13669 - 14454 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00610
Location and strand information: 14456 - 15196 (+)
Family: GT26
Protein type: CAZyme
Protein description: UDP-N-acetyl-D-mannosaminuronic acid transferase
Protein isoelectric point: 5.4731
Protein molecular weight: 28441.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00611
Location and strand information: 15171 - 16256 (+)
Family: GT4
Protein type: CAZyme
Protein description: Glycosyltransferase Gtf1
Protein isoelectric point: 8.8392
Protein molecular weight: 40857.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00612
Location and strand information: 16253 - 17347 (+)
Family: GT0
Protein type: CAZyme
Protein description: UDP-N-acetylglucosamine 2-epimerase
Protein isoelectric point: 4.9271
Protein molecular weight: 41062.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00613
Location and strand information: 17347 - 18312 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 7.0394
Protein molecular weight: 37743.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00614
Location and strand information: 18319 - 19734 (+)
Family: 2.A.66.2.16
Protein type: TC
Protein description: Putative O-antigen transporter

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00615
Location and strand information: 19929 - 21089 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00616
Location and strand information: 21252 - 22349 (+)
Family: Pyr_redox
Protein type: STP
Protein description: UDP-galactopyranose mutase

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00617
Location and strand information: 22374 - 23426 (+)
Family: GT113
Protein type: CAZyme
Protein description: Beta-1,6-galactofuranosyltransferase WbbI
Protein isoelectric point: 7.588
Protein molecular weight: 39454.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00618
Location and strand information: 23626 - 25605 (+)
Family: 3.A.1.5.19
Protein type: TC
Protein description: Oligopeptide-binding protein SarA

Gene clsuter ID: MGYG000003392_63|CGC1
Gene ID: MGYG000003392_00619
Location and strand information: 25747 - 27933 (-)
Family: GT51
Protein type: CAZyme
Protein description: Penicillin-binding protein 1A
Protein isoelectric point: 4.9182
Protein molecular weight: 80821.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003392_00601	Glucan 1,6-alpha-glucosidase	CAZyme	2584	4194	+	GH13\| GH13_31
MGYG000003392_00602	Oligopeptide-binding protein SarA	TC	4362	6329	+	3.A.1.5.25
MGYG000003392_00603	Oligopeptide-binding protein SarA	TC	6531	8489	+	3.A.1.5.19
MGYG000003392_00604	Transcriptional regulator LytR	null	8679	10124	+	DNA_PPF\| LytR_cpsA_psr
MGYG000003392_00605	Tyrosine-protein phosphatase CpsB	null	10131	10862	+	CpsB_CapC
MGYG000003392_00606	putative capsular polysaccharide biosynthesis protein YwqC	TC	10871	11563	+	8.A.3.2.3
MGYG000003392_00607	Tyrosine-protein kinase CpsD	TC	11574	12275	+	8.A.3.2.2
MGYG000003392_00608	hypothetical protein	TC	12297	13664	+	9.B.18.1.2
MGYG000003392_00609	hypothetical protein	null	13669	14454	+	LicD
MGYG000003392_00610	UDP-N-acetyl-D-mannosaminuronic acid transferase	CAZyme	14456	15196	+	GT26
MGYG000003392_00611	Glycosyltransferase Gtf1	CAZyme	15171	16256	+	GT4
MGYG000003392_00612	UDP-N-acetylglucosamine 2-epimerase	CAZyme	16253	17347	+	GT0
MGYG000003392_00613	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	17347	18312	+	GT2
MGYG000003392_00614	Putative O-antigen transporter	TC	18319	19734	+	2.A.66.2.16
MGYG000003392_00615	hypothetical protein	null	19929	21089	+	No domain
MGYG000003392_00616	UDP-galactopyranose mutase	STP	21252	22349	+	Pyr_redox
MGYG000003392_00617	Beta-1,6-galactofuranosyltransferase WbbI	CAZyme	22374	23426	+	GT113
MGYG000003392_00618	Oligopeptide-binding protein SarA	TC	23626	25605	+	3.A.1.5.19
MGYG000003392_00619	Penicillin-binding protein 1A	CAZyme	25747	27933	-	GT51
Protein ID	Protein Name	Type	Start	End	Strand	Signature