dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003393_34|CGC4
Gene ID: MGYG000003393_04198
Location and strand information: 167555 - 168889 (-)
Family: 1.B.19.1.1
Protein type: TC
Protein description: Porin B

Gene clsuter ID: MGYG000003393_34|CGC4
Gene ID: MGYG000003393_04199
Location and strand information: 169103 - 170065 (-)
Family: 8.A.5.1.6
Protein type: TC
Protein description: Protein tas

Gene clsuter ID: MGYG000003393_34|CGC4
Gene ID: MGYG000003393_04200
Location and strand information: 170454 - 171587 (+)
Family: GH10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7607
Protein molecular weight: 41266.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003393_34|CGC4
Gene ID: MGYG000003393_04201
Location and strand information: 171689 - 173350 (-)
Family: MCPsignal
Protein type: STP
Protein description: Methyl-accepting chemotaxis protein I

Gene clsuter ID: MGYG000003393_34|CGC4
Gene ID: MGYG000003393_04202
Location and strand information: 173913 - 174125 (-)
Family: CSD
Protein type: TF
Protein description: Cold shock-like protein CspJ

Gene clsuter ID: MGYG000003393_34|CGC4
Gene ID: MGYG000003393_04203
Location and strand information: 174559 - 174783 (+)
Family: 9.A.8.1.10
Protein type: TC
Protein description: Fe(2+) transport protein A

Gene clsuter ID: MGYG000003393_34|CGC4
Gene ID: MGYG000003393_04204
Location and strand information: 174783 - 177104 (+)
Family: 9.A.8.1.10
Protein type: TC
Protein description: Fe(2+) transporter FeoB

Gene clsuter ID: MGYG000003393_34|CGC4
Gene ID: MGYG000003393_04205
Location and strand information: 177967 - 178965 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 8.2291
Protein molecular weight: 38275.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003393_34|CGC4
Gene ID: MGYG000003393_04206
Location and strand information: 178962 - 180266 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003393_34|CGC4
Gene ID: MGYG000003393_04207
Location and strand information: 180669 - 181664 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 7.0385
Protein molecular weight: 38700.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003393_04198	Porin B	TC	167555	168889	-	1.B.19.1.1
MGYG000003393_04199	Protein tas	TC	169103	170065	-	8.A.5.1.6
MGYG000003393_04200	hypothetical protein	CAZyme	170454	171587	+	GH10
MGYG000003393_04201	Methyl-accepting chemotaxis protein I	STP	171689	173350	-	MCPsignal
MGYG000003393_04202	Cold shock-like protein CspJ	TF	173913	174125	-	CSD
MGYG000003393_04203	Fe(2+) transport protein A	TC	174559	174783	+	9.A.8.1.10
MGYG000003393_04204	Fe(2+) transporter FeoB	TC	174783	177104	+	9.A.8.1.10
MGYG000003393_04205	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	177967	178965	+	GT2
MGYG000003393_04206	hypothetical protein	null	178962	180266	+	Polysacc_synt_3\| Polysacc_synt_C
MGYG000003393_04207	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	180669	181664	+	GT2
Protein ID	Protein Name	Type	Start	End	Strand	Signature