dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02586
Location and strand information: 43334 - 44107 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7278
Protein molecular weight: 29207.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02587
Location and strand information: 44108 - 45385 (-)
Family: GT30
Protein type: CAZyme
Protein description: 3-deoxy-D-manno-octulosonic acid transferase
Protein isoelectric point: 9.9659
Protein molecular weight: 47702.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02588
Location and strand information: 45511 - 46524 (+)
Family: GT9
Protein type: CAZyme
Protein description: Lipopolysaccharide core heptosyltransferase RfaQ
Protein isoelectric point: 8.9496
Protein molecular weight: 38244.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02589
Location and strand information: 46569 - 47669 (-)
Family: GT4
Protein type: CAZyme
Protein description: N-acetylgalactosamine-N,N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase
Protein isoelectric point: 8.764
Protein molecular weight: 40336.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02590
Location and strand information: 47672 - 48799 (-)
Family: GT4
Protein type: CAZyme
Protein description: Lipopolysaccharide core biosynthesis protein RfaG
Protein isoelectric point: 9.4764
Protein molecular weight: 42361.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02591
Location and strand information: 48796 - 49797 (-)
Family: GT9
Protein type: CAZyme
Protein description: Lipopolysaccharide core heptosyltransferase RfaQ
Protein isoelectric point: 7.2593
Protein molecular weight: 37203.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02592
Location and strand information: 50089 - 51045 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02593
Location and strand information: 51054 - 52148 (+)
Family: GT9
Protein type: CAZyme
Protein description: ADP-heptose--LPS heptosyltransferase 2
Protein isoelectric point: 9.2512
Protein molecular weight: 41233.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02594
Location and strand information: 52185 - 53165 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 9.0632
Protein molecular weight: 37345.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02595
Location and strand information: 53162 - 54403 (-)
Family: 9.B.67.5.1
Protein type: TC
Protein description: O-antigen ligase

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02596
Location and strand information: 54432 - 55598 (-)
Family: GT4
Protein type: CAZyme
Protein description: Glycosyltransferase Gtf1
Protein isoelectric point: 8.1711
Protein molecular weight: 43464.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02597
Location and strand information: 55595 - 56560 (-)
Family: GT9
Protein type: CAZyme
Protein description: Lipopolysaccharide heptosyltransferase 1
Protein isoelectric point: 8.4804
Protein molecular weight: 35980
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_14|CGC1
Gene ID: MGYG000003399_02598
Location and strand information: 56563 - 57609 (-)
Family: GT9
Protein type: CAZyme
Protein description: ADP-heptose--LPS heptosyltransferase 2
Protein isoelectric point: 8.1274
Protein molecular weight: 38576.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003399_02586	hypothetical protein	CAZyme	43334	44107	-	GT2
MGYG000003399_02587	3-deoxy-D-manno-octulosonic acid transferase	CAZyme	44108	45385	-	GT30
MGYG000003399_02588	Lipopolysaccharide core heptosyltransferase RfaQ	CAZyme	45511	46524	+	GT9
MGYG000003399_02589	N-acetylgalactosamine-N,N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase	CAZyme	46569	47669	-	GT4
MGYG000003399_02590	Lipopolysaccharide core biosynthesis protein RfaG	CAZyme	47672	48799	-	GT4
MGYG000003399_02591	Lipopolysaccharide core heptosyltransferase RfaQ	CAZyme	48796	49797	-	GT9
MGYG000003399_02592	hypothetical protein	null	50089	51045	+	No domain
MGYG000003399_02593	ADP-heptose--LPS heptosyltransferase 2	CAZyme	51054	52148	+	GT9
MGYG000003399_02594	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	52185	53165	-	GT2
MGYG000003399_02595	O-antigen ligase	TC	53162	54403	-	9.B.67.5.1
MGYG000003399_02596	Glycosyltransferase Gtf1	CAZyme	54432	55598	-	GT4
MGYG000003399_02597	Lipopolysaccharide heptosyltransferase 1	CAZyme	55595	56560	-	GT9
MGYG000003399_02598	ADP-heptose--LPS heptosyltransferase 2	CAZyme	56563	57609	-	GT9
Protein ID	Protein Name	Type	Start	End	Strand	Signature