dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003675_89|CGC2
Gene ID: MGYG000003675_00903
Location and strand information: 20017 - 20943 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003675_89|CGC2
Gene ID: MGYG000003675_00904
Location and strand information: 20955 - 21812 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003675_89|CGC2
Gene ID: MGYG000003675_00905
Location and strand information: 21893 - 22708 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003675_89|CGC2
Gene ID: MGYG000003675_00906
Location and strand information: 22861 - 24417 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1439
Protein molecular weight: 57476.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003675_89|CGC2
Gene ID: MGYG000003675_00907
Location and strand information: 24421 - 25566 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.8707
Protein molecular weight: 44181.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003675_89|CGC2
Gene ID: MGYG000003675_00908
Location and strand information: 25631 - 27109 (-)
Family: null
Protein type: null
Protein description: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase

Gene clsuter ID: MGYG000003675_89|CGC2
Gene ID: MGYG000003675_00909
Location and strand information: 27132 - 28670 (-)
Family: null
Protein type: null
Protein description: Cell division protein FtsQ

Gene clsuter ID: MGYG000003675_89|CGC2
Gene ID: MGYG000003675_00910
Location and strand information: 28707 - 29834 (-)
Family: GT28
Protein type: CAZyme
Protein description: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
Protein isoelectric point: 8.6325
Protein molecular weight: 39999.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003675_89|CGC2
Gene ID: MGYG000003675_00911
Location and strand information: 29847 - 31139 (-)
Family: 2.A.103.1.3
Protein type: TC
Protein description: putative peptidoglycan glycosyltransferase FtsW

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003675_00903	Lactose transport system permease protein LacF	TC	20017	20943	+	3.A.1.1.11
MGYG000003675_00904	L-arabinose transport system permease protein AraQ	TC	20955	21812	+	3.A.1.1.11
MGYG000003675_00905	HTH-type transcriptional activator RhaR	TF	21893	22708	-	HTH_AraC+HTH_AraC
MGYG000003675_00906	hypothetical protein	CAZyme	22861	24417	+	GH28
MGYG000003675_00907	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	24421	25566	+	GH105
MGYG000003675_00908	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	null	25631	27109	-	Mur_ligase_M\| Mur_ligase_C
MGYG000003675_00909	Cell division protein FtsQ	null	27132	28670	-	POTRA_1
MGYG000003675_00910	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	CAZyme	28707	29834	-	GT28
MGYG000003675_00911	putative peptidoglycan glycosyltransferase FtsW	TC	29847	31139	-	2.A.103.1.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature