logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000003687_14|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Created with SnapTCnullCAZymeTF45728471934865850123515895305454519559855745058915

Gene composition table

Protein IDProtein NameTypeStartEndStrandSignature
MGYG000003687_03324
sn-glycerol-3-phosphate-binding periplasmic protein UgpB
TC 45728 47095 - 3.A.1.1.3
MGYG000003687_03325
hypothetical protein
TC 47213 48034 - 3.A.1.1.3
MGYG000003687_03326
sn-glycerol-3-phosphate transport system permease protein UgpA
TC 48031 49062 - 3.A.1.1.3
MGYG000003687_03327
hypothetical protein
null 49190 49510 + No domain
MGYG000003687_03328
hypothetical protein
null 49625 50002 - No domain
MGYG000003687_03329
Peptidoglycan-N-acetylglucosamine deacetylase
CAZyme 50369 51157 + CE4
MGYG000003687_03330
hypothetical protein
null 51359 52684 - EstA_Ig_like| Peptidase_S9
MGYG000003687_03331
HTH-type transcriptional activator RhaS
TF 52785 53657 - HTH_AraC+HTH_AraC
MGYG000003687_03332
Homoserine/homoserine lactone efflux protein
TC 54065 54688 - 2.A.76.1.7
MGYG000003687_03333
hypothetical protein
null 54746 55021 - Phage_terminase
Protein IDProtein NameTypeStartEndStrandSignature
Showing 1 to 10 of 16 entries

Substrate predicted by dbCAN-PUL is arabinan download this fig


Genomic location

1,990 Pageviews
Mar. 06th - Apr. 06th