dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003695_7|CGC1
Gene ID: MGYG000003695_01336
Location and strand information: 22271 - 23206 (+)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003695_7|CGC1
Gene ID: MGYG000003695_01337
Location and strand information: 23203 - 24087 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003695_7|CGC1
Gene ID: MGYG000003695_01338
Location and strand information: 24288 - 26327 (+)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BgaA
Protein isoelectric point: 4.7641
Protein molecular weight: 78509.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003695_7|CGC1
Gene ID: MGYG000003695_01339
Location and strand information: 26611 - 27579 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003695_7|CGC1
Gene ID: MGYG000003695_01340
Location and strand information: 27667 - 29823 (+)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7062
Protein molecular weight: 81590.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003695_7|CGC1
Gene ID: MGYG000003695_01341
Location and strand information: 30047 - 31084 (+)
Family: LacI
Protein type: TF
Protein description: Ribose operon repressor

Gene clsuter ID: MGYG000003695_7|CGC1
Gene ID: MGYG000003695_01342
Location and strand information: 31324 - 31749 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003695_7|CGC1
Gene ID: MGYG000003695_01343
Location and strand information: 32045 - 32638 (+)
Family: 3.D.1.5.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003695_7|CGC1
Gene ID: MGYG000003695_01344
Location and strand information: 32635 - 34506 (+)
Family: 3.D.1.5.1
Protein type: TC
Protein description: Electron transport complex subunit RsxC

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003695_01336	Lactose transport system permease protein LacF	TC	22271	23206	+	3.A.1.1.4
MGYG000003695_01337	hypothetical protein	TC	23203	24087	+	3.A.1.1.34
MGYG000003695_01338	Beta-galactosidase BgaA	CAZyme	24288	26327	+	GH42
MGYG000003695_01339	hypothetical protein	null	26611	27579	+	Transposase_31
MGYG000003695_01340	hypothetical protein	CAZyme	27667	29823	+	GH78\| CBM67
MGYG000003695_01341	Ribose operon repressor	TF	30047	31084	+	LacI
MGYG000003695_01342	hypothetical protein	null	31324	31749	+	DUF5060
MGYG000003695_01343	hypothetical protein	TC	32045	32638	+	3.D.1.5.1
MGYG000003695_01344	Electron transport complex subunit RsxC	TC	32635	34506	+	3.D.1.5.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature