dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01410
Location and strand information: 46922 - 48283 (+)
Family: 2.A.22.5.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01411
Location and strand information: 48384 - 49739 (+)
Family: 2.A.22.5.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01412
Location and strand information: 49837 - 50796 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01415
Location and strand information: 51397 - 54366 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01416
Location and strand information: 54385 - 56052 (+)
Family: 8.A.46.1.1
Protein type: TC
Protein description: Starch-binding protein SusD

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01417
Location and strand information: 56065 - 57453 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01418
Location and strand information: 57578 - 58654 (+)
Family: GH53|CBM61
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 5.26
Protein molecular weight: 39711.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01419
Location and strand information: 58743 - 61202 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 7.4678
Protein molecular weight: 92422.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01420
Location and strand information: 61589 - 64438 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01421
Location and strand information: 64718 - 67654 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003697_13|CGC2
Gene ID: MGYG000003697_01422
Location and strand information: 67675 - 69201 (+)
Family: 8.A.46.1.5
Protein type: TC
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003697_01410	hypothetical protein	TC	46922	48283	+	2.A.22.5.3
MGYG000003697_01411	hypothetical protein	TC	48384	49739	+	2.A.22.5.3
MGYG000003697_01412	hypothetical protein	null	49837	50796	-	HHH_3\| HHH_3\| HHH_3
MGYG000003697_01415	TonB-dependent receptor SusC	TC	51397	54366	+	1.B.14.6.1
MGYG000003697_01416	Starch-binding protein SusD	TC	54385	56052	+	8.A.46.1.1
MGYG000003697_01417	hypothetical protein	null	56065	57453	+	SusE\| DUF5111\| DUF5114
MGYG000003697_01418	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	57578	58654	+	GH53\| CBM61
MGYG000003697_01419	Beta-galactosidase BoGH2A	CAZyme	58743	61202	+	GH2
MGYG000003697_01420	HTH-type transcriptional activator RhaS	TF	61589	64438	+	HTH_AraC
MGYG000003697_01421	TonB-dependent receptor SusC	TC	64718	67654	+	1.B.14.6.1
MGYG000003697_01422	hypothetical protein	TC	67675	69201	+	8.A.46.1.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature