dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00199
Location and strand information: 6737 - 7423 (+)
Family: 2.A.88.8.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00200
Location and strand information: 7420 - 8388 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00201
Location and strand information: 8460 - 9077 (-)
Family: null
Protein type: null
Protein description: D-ribitol-5-phosphate phosphatase

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00202
Location and strand information: 9108 - 10403 (-)
Family: 3.A.1.11.7
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00203
Location and strand information: 10453 - 11241 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00204
Location and strand information: 11238 - 12038 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Spermidine/putrescine transport system permease protein PotB

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00205
Location and strand information: 12028 - 13434 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00206
Location and strand information: 13619 - 14908 (-)
Family: 2.A.1.36.1
Protein type: TC
Protein description: Inner membrane transport protein YnfM

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00207
Location and strand information: 15010 - 15891 (+)
Family: HTH_1
Protein type: TF
Protein description: HTH-type transcriptional regulator CynR

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00208
Location and strand information: 16015 - 18495 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.388
Protein molecular weight: 93856.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00209
Location and strand information: 18498 - 19979 (-)
Family: 8.A.46.1.3
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00210
Location and strand information: 20004 - 23084 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00211
Location and strand information: 23283 - 24440 (-)
Family: PL38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0848
Protein molecular weight: 44577.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00212
Location and strand information: 24451 - 28566 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00213
Location and strand information: 28606 - 31170 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00214
Location and strand information: 31296 - 33239 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 5.1526
Protein molecular weight: 73123.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00215
Location and strand information: 33236 - 35188 (-)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 6.4407
Protein molecular weight: 73407.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00216
Location and strand information: 35378 - 36457 (+)
Family: null
Protein type: null
Protein description: Aldose 1-epimerase

Gene clsuter ID: MGYG000003957_3|CGC1
Gene ID: MGYG000003957_00217
Location and strand information: 36507 - 37790 (+)
Family: 2.A.1.7.17
Protein type: TC
Protein description: L-fucose-proton symporter

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003957_00199	hypothetical protein	TC	6737	7423	+	2.A.88.8.3
MGYG000003957_00200	hypothetical protein	null	7420	8388	-	Mfa2
MGYG000003957_00201	D-ribitol-5-phosphate phosphatase	null	8460	9077	-	HAD_2
MGYG000003957_00202	hypothetical protein	TC	9108	10403	-	3.A.1.11.7
MGYG000003957_00203	hypothetical protein	TC	10453	11241	-	3.A.1.11.8
MGYG000003957_00204	Spermidine/putrescine transport system permease protein PotB	TC	11238	12038	-	3.A.1.11.8
MGYG000003957_00205	Vitamin B12 import ATP-binding protein BtuD	TC	12028	13434	-	3.A.1.11.8
MGYG000003957_00206	Inner membrane transport protein YnfM	TC	13619	14908	-	2.A.1.36.1
MGYG000003957_00207	HTH-type transcriptional regulator CynR	TF	15010	15891	+	HTH_1
MGYG000003957_00208	Beta-galactosidase	CAZyme	16015	18495	-	GH2
MGYG000003957_00209	SusD-like protein	TC	18498	19979	-	8.A.46.1.3
MGYG000003957_00210	TonB-dependent receptor SusC	TC	20004	23084	-	1.B.14.6.1
MGYG000003957_00211	hypothetical protein	CAZyme	23283	24440	-	PL38
MGYG000003957_00212	Sensor histidine kinase RcsC	TF	24451	28566	-	HTH_AraC+HTH_AraC
MGYG000003957_00213	hypothetical protein	null	28606	31170	-	No domain
MGYG000003957_00214	Retaining alpha-galactosidase	CAZyme	31296	33239	-	GH97
MGYG000003957_00215	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	33236	35188	-	GH51
MGYG000003957_00216	Aldose 1-epimerase	null	35378	36457	+	Aldose_epim
MGYG000003957_00217	L-fucose-proton symporter	TC	36507	37790	+	2.A.1.7.17
Protein ID	Protein Name	Type	Start	End	Strand	Signature