dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01450
Location and strand information: 557 - 3070 (+)
Family: CBM2|GH95|CBM13|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1317
Protein molecular weight: 93406.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01451
Location and strand information: 3084 - 5504 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 5.5841
Protein molecular weight: 90894.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01452
Location and strand information: 5530 - 6297 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01453
Location and strand information: 6496 - 7485 (+)
Family: CBM32|GH43_18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3388
Protein molecular weight: 38255.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01454
Location and strand information: 7534 - 9486 (+)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3107
Protein molecular weight: 73628.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01455
Location and strand information: 9500 - 11032 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 6.9406
Protein molecular weight: 57528.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01456
Location and strand information: 11182 - 12714 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.3493
Protein molecular weight: 57058.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01457
Location and strand information: 12736 - 13935 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.1489
Protein molecular weight: 46125.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01458
Location and strand information: 14110 - 16392 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01459
Location and strand information: 16857 - 19739 (+)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2716
Protein molecular weight: 103137.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01460
Location and strand information: 19806 - 20603 (+)
Family: CE12
Protein type: CAZyme
Protein description: putative rhamnogalacturonan acetylesterase YesY
Protein isoelectric point: 9.4421
Protein molecular weight: 29423.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01461
Location and strand information: 20766 - 23651 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.6436
Protein molecular weight: 107954.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01462
Location and strand information: 23661 - 26474 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6505
Protein molecular weight: 104980.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01463
Location and strand information: 26690 - 28171 (+)
Family: null
Protein type: null
Protein description: L-Rhamnulokinase

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01464
Location and strand information: 28204 - 29454 (+)
Family: null
Protein type: null
Protein description: L-rhamnose isomerase

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01465
Location and strand information: 29545 - 30558 (+)
Family: 2.A.7.6.1
Protein type: TC
Protein description: L-rhamnose-proton symporter

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01466
Location and strand information: 30590 - 31399 (+)
Family: null
Protein type: null
Protein description: Rhamnulose-1-phosphate aldolase

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01467
Location and strand information: 31433 - 32746 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3295
Protein molecular weight: 49970.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01468
Location and strand information: 32826 - 34259 (+)
Family: GH28|GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1383
Protein molecular weight: 52594.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01469
Location and strand information: 34642 - 36789 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01470
Location and strand information: 36850 - 39261 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004021_16|CGC1
Gene ID: MGYG000004021_01471
Location and strand information: 39280 - 42576 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004021_01450	GH95_e0\|CBM32_e77\|CBM2_e92\|CBM13_e181\|3.2.1.-	xylan\|pectin
MGYG000004021_01451	GH2_e59\|3.2.1.23	beta-galactan
MGYG000004021_01453	CBM32_e74\|3.2.1.55
MGYG000004021_01454	GH51_e23\|3.2.1.55	arabinan
MGYG000004021_01455	GH51_e14\|3.2.1.55	arabinan
MGYG000004021_01456	GH105_e12
MGYG000004021_01457	GH105_e12
MGYG000004021_01459	PL1_e12
MGYG000004021_01460	CE12_e25
MGYG000004021_01461	GH2_e89\|3.2.1.23	beta-galactan
MGYG000004021_01462	GH106_e0\|3.2.1.174	pectin
MGYG000004021_01467	GH105_e39
MGYG000004021_01468	GH28_e38\|GH105_e32\|3.2.1.67	pectin

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004021_01450	hypothetical protein	CAZyme	557	3070	+	CBM2\| GH95\| CBM13\| CBM32
MGYG000004021_01451	Beta-galactosidase BoGH2A	CAZyme	3084	5504	+	GH2
MGYG000004021_01452	hypothetical protein	null	5530	6297	+	Lipase_GDSL_2
MGYG000004021_01453	hypothetical protein	CAZyme	6496	7485	+	CBM32\| GH43_18
MGYG000004021_01454	hypothetical protein	CAZyme	7534	9486	+	GH51
MGYG000004021_01455	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	9500	11032	+	GH51
MGYG000004021_01456	hypothetical protein	CAZyme	11182	12714	+	GH105
MGYG000004021_01457	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	12736	13935	+	GH105
MGYG000004021_01458	hypothetical protein	null	14110	16392	+	Por_Secre_tail
MGYG000004021_01459	hypothetical protein	CAZyme	16857	19739	+	PL1_2\| PL1
MGYG000004021_01460	putative rhamnogalacturonan acetylesterase YesY	CAZyme	19806	20603	+	CE12
MGYG000004021_01461	Beta-galactosidase	CAZyme	20766	23651	+	GH2
MGYG000004021_01462	hypothetical protein	CAZyme	23661	26474	+	GH106
MGYG000004021_01463	L-Rhamnulokinase	null	26690	28171	+	FGGY_N\| FGGY_C
MGYG000004021_01464	L-rhamnose isomerase	null	28204	29454	+	RhaA
MGYG000004021_01465	L-rhamnose-proton symporter	TC	29545	30558	+	2.A.7.6.1
MGYG000004021_01466	Rhamnulose-1-phosphate aldolase	null	30590	31399	+	Aldolase_II
MGYG000004021_01467	hypothetical protein	CAZyme	31433	32746	+	GH105
MGYG000004021_01468	hypothetical protein	CAZyme	32826	34259	+	GH28\| GH105
MGYG000004021_01469	hypothetical protein	null	34642	36789	+	No domain
MGYG000004021_01470	hypothetical protein	null	36850	39261	+	Fasciclin
MGYG000004021_01471	TonB-dependent receptor SusC	TC	39280	42576	+	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature