dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01718
Location and strand information: 21708 - 22565 (-)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01719
Location and strand information: 22569 - 23498 (-)
Family: 3.A.1.1.4
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01720
Location and strand information: 23565 - 26450 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01721
Location and strand information: 26495 - 27865 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01722
Location and strand information: 28451 - 30823 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7153
Protein molecular weight: 89527.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01723
Location and strand information: 30924 - 31874 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01724
Location and strand information: 31879 - 33861 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.8105
Protein molecular weight: 75593.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01725
Location and strand information: 33910 - 35901 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase YesZ
Protein isoelectric point: 6.5326
Protein molecular weight: 76469.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01726
Location and strand information: 36049 - 38421 (-)
Family: CBM32|GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.918
Protein molecular weight: 88556.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01727
Location and strand information: 38931 - 39869 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004022_13|CGC1
Gene ID: MGYG000004022_01728
Location and strand information: 40027 - 40566 (-)
Family: 9.A.11.1.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004022_01718	L-arabinose transport system permease protein AraQ	TC	21708	22565	-	3.A.1.1.34
MGYG000004022_01719	hypothetical protein	TC	22569	23498	-	3.A.1.1.4
MGYG000004022_01720	hypothetical protein	STP	23565	26450	-	SBP_bac_1
MGYG000004022_01721	hypothetical protein	STP	26495	27865	-	SBP_bac_1
MGYG000004022_01722	hypothetical protein	CAZyme	28451	30823	+	GH78
MGYG000004022_01723	hypothetical protein	null	30924	31874	-	URO-D
MGYG000004022_01724	Beta-galactosidase	CAZyme	31879	33861	-	GH2
MGYG000004022_01725	Beta-galactosidase YesZ	CAZyme	33910	35901	-	GH42
MGYG000004022_01726	hypothetical protein	CAZyme	36049	38421	-	CBM32\| GH141
MGYG000004022_01727	HTH-type transcriptional activator RhaR	TF	38931	39869	+	HTH_AraC
MGYG000004022_01728	hypothetical protein	TC	40027	40566	-	9.A.11.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature