dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00575
Location and strand information: 3253 - 5649 (+)
Family: 5.A.3.3.1
Protein type: TC
Protein description: Perchlorate reductase subunit alpha

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00576
Location and strand information: 5659 - 6057 (+)
Family: Fer4
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00577
Location and strand information: 6230 - 7495 (+)
Family: GT4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3505
Protein molecular weight: 46396.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00578
Location and strand information: 7637 - 8866 (+)
Family: Aminotran_1_2
Protein type: STP
Protein description: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00579
Location and strand information: 8867 - 9487 (+)
Family: 9.B.18.1.2
Protein type: TC
Protein description: Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00580
Location and strand information: 9599 - 10009 (+)
Family: null
Protein type: null
Protein description: Peptide deformylase

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00581
Location and strand information: 10181 - 10858 (-)
Family: 3.A.1.24.5
Protein type: TC
Protein description: Methionine import system permease protein MetP

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00582
Location and strand information: 10862 - 11611 (-)
Family: 3.A.1.24.2
Protein type: TC
Protein description: Methionine import ATP-binding protein MetN

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00583
Location and strand information: 11641 - 12504 (-)
Family: 3.A.1.24.5
Protein type: TC
Protein description: Membrane lipoprotein TpN32

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00584
Location and strand information: 12837 - 14180 (+)
Family: null
Protein type: null
Protein description: Glutamine synthetase

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00585
Location and strand information: 14213 - 14890 (+)
Family: Trans_reg_C
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00586
Location and strand information: 14918 - 16537 (-)
Family: 1.I.1.1.3
Protein type: TC
Protein description: ATP-dependent RNA helicase RhlE

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00587
Location and strand information: 16583 - 18016 (-)
Family: GT28
Protein type: CAZyme
Protein description: Processive diacylglycerol beta-glucosyltransferase
Protein isoelectric point: 6.8117
Protein molecular weight: 52277.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00588
Location and strand information: 18032 - 18481 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00589
Location and strand information: 18716 - 19702 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 4.6273
Protein molecular weight: 36496.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00590
Location and strand information: 20484 - 23516 (+)
Family: 3.A.1.106.12
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00592
Location and strand information: 23745 - 25097 (+)
Family: null
Protein type: null
Protein description: 23S rRNA (uracil-C(5))-methyltransferase RlmCD

Gene clsuter ID: MGYG000004041_10|CGC1
Gene ID: MGYG000004041_00594
Location and strand information: 25480 - 26007 (+)
Family: 3.D.1.8.1
Protein type: TC
Protein description: putative peptidyl-prolyl cis-trans isomerase

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004041_00575	Perchlorate reductase subunit alpha	TC	3253	5649	+	5.A.3.3.1
MGYG000004041_00576	hypothetical protein	STP	5659	6057	+	Fer4
MGYG000004041_00577	hypothetical protein	CAZyme	6230	7495	+	GT4
MGYG000004041_00578	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	STP	7637	8866	+	Aminotran_1_2
MGYG000004041_00579	Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase	TC	8867	9487	+	9.B.18.1.2
MGYG000004041_00580	Peptide deformylase	null	9599	10009	+	Pep_deformylase
MGYG000004041_00581	Methionine import system permease protein MetP	TC	10181	10858	-	3.A.1.24.5
MGYG000004041_00582	Methionine import ATP-binding protein MetN	TC	10862	11611	-	3.A.1.24.2
MGYG000004041_00583	Membrane lipoprotein TpN32	TC	11641	12504	-	3.A.1.24.5
MGYG000004041_00584	Glutamine synthetase	null	12837	14180	+	Gln-synt_N\| Gln-synt_C
MGYG000004041_00585	hypothetical protein	TF	14213	14890	+	Trans_reg_C
MGYG000004041_00586	ATP-dependent RNA helicase RhlE	TC	14918	16537	-	1.I.1.1.3
MGYG000004041_00587	Processive diacylglycerol beta-glucosyltransferase	CAZyme	16583	18016	-	GT28
MGYG000004041_00588	hypothetical protein	null	18032	18481	-	GtrA
MGYG000004041_00589	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	18716	19702	+	GT2
MGYG000004041_00590	Vitamin B12 import ATP-binding protein BtuD	TC	20484	23516	+	3.A.1.106.12
MGYG000004041_00592	23S rRNA (uracil-C(5))-methyltransferase RlmCD	null	23745	25097	+	TRAM\| tRNA_U5-meth_tr
MGYG000004041_00594	putative peptidyl-prolyl cis-trans isomerase	TC	25480	26007	+	3.D.1.8.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature