dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00974
Location and strand information: 18583 - 19797 (+)
Family: 3.A.1.1.16
Protein type: TC
Protein description: Cyclodextrin-binding protein

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00975
Location and strand information: 19794 - 20708 (+)
Family: 3.A.1.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00976
Location and strand information: 20705 - 21550 (+)
Family: 3.A.1.1.6
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00977
Location and strand information: 21557 - 23272 (+)
Family: GH13|GH13_20|CBM34
Protein type: CAZyme
Protein description: Neopullulanase
Protein isoelectric point: 6.2798
Protein molecular weight: 65991.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00978
Location and strand information: 23294 - 24322 (+)
Family: LacI
Protein type: TF
Protein description: Ribose operon repressor

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00979
Location and strand information: 25315 - 25584 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00980
Location and strand information: 25599 - 27440 (-)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6385
Protein molecular weight: 68900.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00981
Location and strand information: 27529 - 29076 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00982
Location and strand information: 29131 - 30018 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00983
Location and strand information: 30043 - 30987 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00984
Location and strand information: 31255 - 33051 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00985
Location and strand information: 33036 - 34430 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00986
Location and strand information: 34469 - 35221 (+)
Family: null
Protein type: null
Protein description: Anaerobic sulfatase-maturating enzyme

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00987
Location and strand information: 35601 - 37307 (+)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00988
Location and strand information: 37273 - 38022 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: putative response regulatory protein

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00989
Location and strand information: 38114 - 39385 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00990
Location and strand information: 39467 - 40375 (+)
Family: 3.A.1.1.7
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00991
Location and strand information: 40387 - 41220 (+)
Family: 3.A.1.1.7
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00992
Location and strand information: 41226 - 42575 (+)
Family: null
Protein type: null
Protein description: Arylsulfatase

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00993
Location and strand information: 42660 - 44069 (+)
Family: null
Protein type: null
Protein description: Pyrophosphate--fructose 6-phosphate 1-phosphotransferase

Gene clsuter ID: MGYG000004052_6|CGC1
Gene ID: MGYG000004052_00994
Location and strand information: 44071 - 44850 (+)
Family: 2.A.102.4.4
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004052_00974	Cyclodextrin-binding protein	TC	18583	19797	+	3.A.1.1.16
MGYG000004052_00975	hypothetical protein	TC	19794	20708	+	3.A.1.1.2
MGYG000004052_00976	Inner membrane ABC transporter permease protein YcjP	TC	20705	21550	+	3.A.1.1.6
MGYG000004052_00977	Neopullulanase	CAZyme	21557	23272	+	GH13\| GH13_20\| CBM34
MGYG000004052_00978	Ribose operon repressor	TF	23294	24322	+	LacI
MGYG000004052_00979	hypothetical protein	null	25315	25584	-	Glyco_hydro_35
MGYG000004052_00980	hypothetical protein	CAZyme	25599	27440	-	GH20
MGYG000004052_00981	hypothetical protein	STP	27529	29076	-	SBP_bac_1
MGYG000004052_00982	Inner membrane ABC transporter permease protein YcjP	TC	29131	30018	-	3.A.1.1.10
MGYG000004052_00983	putative multiple-sugar transport system permease YteP	TC	30043	30987	-	3.A.1.1.10
MGYG000004052_00984	hypothetical protein	TC	31255	33051	+	8.A.59.2.1
MGYG000004052_00985	HTH-type transcriptional activator RhaR	TF	33036	34430	+	HTH_AraC+HTH_AraC
MGYG000004052_00986	Anaerobic sulfatase-maturating enzyme	null	34469	35221	+	Radical_SAM
MGYG000004052_00987	hypothetical protein	TC	35601	37307	+	9.B.33.1.1
MGYG000004052_00988	putative response regulatory protein	TF	37273	38022	+	HTH_AraC+HTH_AraC
MGYG000004052_00989	hypothetical protein	STP	38114	39385	+	SBP_bac_1
MGYG000004052_00990	hypothetical protein	TC	39467	40375	+	3.A.1.1.7
MGYG000004052_00991	Inner membrane ABC transporter permease protein YcjP	TC	40387	41220	+	3.A.1.1.7
MGYG000004052_00992	Arylsulfatase	null	41226	42575	+	Sulfatase
MGYG000004052_00993	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase	null	42660	44069	+	PFK
MGYG000004052_00994	hypothetical protein	TC	44071	44850	+	2.A.102.4.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature