dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00916
Location and strand information: 24200 - 24985 (-)
Family: 3.A.1.14.12
Protein type: TC
Protein description: Ferric enterobactin transport ATP-binding protein FepC

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00917
Location and strand information: 24989 - 26014 (-)
Family: 3.A.1.14.21
Protein type: TC
Protein description: putative ABC transporter permease protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00918
Location and strand information: 26312 - 27103 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00919
Location and strand information: 27069 - 27986 (-)
Family: Peripla_BP_2
Protein type: STP
Protein description: Vitamin B12-binding protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00920
Location and strand information: 28613 - 31702 (+)
Family: GH0|GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2449
Protein molecular weight: 116160.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00921
Location and strand information: 31803 - 33527 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.923
Protein molecular weight: 65746.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00922
Location and strand information: 33603 - 34586 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00923
Location and strand information: 34583 - 35392 (+)
Family: 2.A.79.1.5
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00924
Location and strand information: 35389 - 35832 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00925
Location and strand information: 35935 - 38265 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 5.5658
Protein molecular weight: 88094.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00926
Location and strand information: 38523 - 39479 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00927
Location and strand information: 39498 - 40421 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00928
Location and strand information: 40483 - 42039 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00929
Location and strand information: 42189 - 44399 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00930
Location and strand information: 44578 - 46578 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BgaP
Protein isoelectric point: 5.3116
Protein molecular weight: 75165.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00932
Location and strand information: 46924 - 47664 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00933
Location and strand information: 47874 - 48305 (+)
Family: 2.A.7.21.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00934
Location and strand information: 48365 - 48874 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00935
Location and strand information: 49009 - 49455 (-)
Family: 1.A.22.1.3
Protein type: TC
Protein description: Large-conductance mechanosensitive channel

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00936
Location and strand information: 49509 - 51212 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00937
Location and strand information: 51342 - 53129 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00938
Location and strand information: 54030 - 55856 (-)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.513
Protein molecular weight: 69701.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00939
Location and strand information: 55859 - 58960 (-)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1737
Protein molecular weight: 119910.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004088_10|CGC1
Gene ID: MGYG000004088_00940
Location and strand information: 59014 - 60000 (-)
Family: GH130
Protein type: CAZyme
Protein description: 1,4-beta-mannosyl-N-acetylglucosamine phosphorylase
Protein isoelectric point: 5.5658
Protein molecular weight: 36893.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004088_00916	Ferric enterobactin transport ATP-binding protein FepC	TC	24200	24985	-	3.A.1.14.12
MGYG000004088_00917	putative ABC transporter permease protein	TC	24989	26014	-	3.A.1.14.21
MGYG000004088_00918	hypothetical protein	null	26312	27103	+	No domain
MGYG000004088_00919	Vitamin B12-binding protein	STP	27069	27986	-	Peripla_BP_2
MGYG000004088_00920	hypothetical protein	CAZyme	28613	31702	+	GH0\| GH106
MGYG000004088_00921	Beta-galactosidase	CAZyme	31803	33527	+	GH2
MGYG000004088_00922	HTH-type transcriptional activator RhaS	TF	33603	34586	+	HTH_AraC+HTH_AraC
MGYG000004088_00923	hypothetical protein	TC	34583	35392	+	2.A.79.1.5
MGYG000004088_00924	hypothetical protein	null	35389	35832	+	ThrE_2
MGYG000004088_00925	Beta-galactosidase BoGH2A	CAZyme	35935	38265	+	GH2
MGYG000004088_00926	putative multiple-sugar transport system permease YteP	TC	38523	39479	+	3.A.1.1.10
MGYG000004088_00927	Inner membrane ABC transporter permease protein YcjP	TC	39498	40421	+	3.A.1.1.10
MGYG000004088_00928	hypothetical protein	STP	40483	42039	+	SBP_bac_1
MGYG000004088_00929	HTH-type transcriptional activator RhaR	TF	42189	44399	+	HTH_AraC+HTH_AraC
MGYG000004088_00930	Beta-galactosidase BgaP	CAZyme	44578	46578	-	GH42
MGYG000004088_00932	hypothetical protein	null	46924	47664	-	Polysacc_deac_1
MGYG000004088_00933	hypothetical protein	TC	47874	48305	+	2.A.7.21.8
MGYG000004088_00934	hypothetical protein	null	48365	48874	-	No domain
MGYG000004088_00935	Large-conductance mechanosensitive channel	TC	49009	49455	-	1.A.22.1.3
MGYG000004088_00936	hypothetical protein	null	49509	51212	-	No domain
MGYG000004088_00937	hypothetical protein	null	51342	53129	-	SH3_3
MGYG000004088_00938	hypothetical protein	CAZyme	54030	55856	-	GH20
MGYG000004088_00939	hypothetical protein	CAZyme	55859	58960	-	GH38
MGYG000004088_00940	1,4-beta-mannosyl-N-acetylglucosamine phosphorylase	CAZyme	59014	60000	-	GH130
Protein ID	Protein Name	Type	Start	End	Strand	Signature