dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004116_23|CGC1
Gene ID: MGYG000004116_02926
Location and strand information: 17602 - 18486 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004116_23|CGC1
Gene ID: MGYG000004116_02927
Location and strand information: 18505 - 19479 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000004116_23|CGC1
Gene ID: MGYG000004116_02928
Location and strand information: 19503 - 21662 (+)
Family: GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3182
Protein molecular weight: 80973.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004116_23|CGC1
Gene ID: MGYG000004116_02929
Location and strand information: 21695 - 23833 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004116_23|CGC1
Gene ID: MGYG000004116_02930
Location and strand information: 23852 - 26011 (+)
Family: GH110
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8704
Protein molecular weight: 77176.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004116_23|CGC1
Gene ID: MGYG000004116_02931
Location and strand information: 26036 - 27685 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004116_23|CGC1
Gene ID: MGYG000004116_02932
Location and strand information: 27762 - 29573 (+)
Family: GH110
Protein type: CAZyme
Protein description: Alpha-1,3-galactosidase B
Protein isoelectric point: 5.9494
Protein molecular weight: 67701.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004116_23|CGC1
Gene ID: MGYG000004116_02933
Location and strand information: 29533 - 31083 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004116_23|CGC1
Gene ID: MGYG000004116_02934
Location and strand information: 31403 - 32494 (-)
Family: HTH_3
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004116_23|CGC1
Gene ID: MGYG000004116_02936
Location and strand information: 33183 - 34298 (+)
Family: 2.A.88.3.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is carrageenan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004116_02926	hypothetical protein	TC	17602	18486	+	3.A.1.1.11
MGYG000004116_02927	L-arabinose transport system permease protein AraQ	TC	18505	19479	+	3.A.1.1.34
MGYG000004116_02928	hypothetical protein	CAZyme	19503	21662	+	GH36
MGYG000004116_02929	hypothetical protein	null	21695	23833	+	No domain
MGYG000004116_02930	hypothetical protein	CAZyme	23852	26011	+	GH110
MGYG000004116_02931	hypothetical protein	STP	26036	27685	+	SBP_bac_1
MGYG000004116_02932	Alpha-1,3-galactosidase B	CAZyme	27762	29573	+	GH110
MGYG000004116_02933	hypothetical protein	null	29533	31083	+	Trehalase
MGYG000004116_02934	hypothetical protein	TF	31403	32494	-	HTH_3
MGYG000004116_02936	hypothetical protein	TC	33183	34298	+	2.A.88.3.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature