dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004188_18|CGC1
Gene ID: MGYG000004188_02183
Location and strand information: 37039 - 40242 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004188_18|CGC1
Gene ID: MGYG000004188_02184
Location and strand information: 40768 - 42300 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004188_18|CGC1
Gene ID: MGYG000004188_02185
Location and strand information: 42318 - 45275 (+)
Family: PL35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5971
Protein molecular weight: 112638.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004188_18|CGC1
Gene ID: MGYG000004188_02186
Location and strand information: 45332 - 47473 (+)
Family: GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8076
Protein molecular weight: 81230.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004188_18|CGC1
Gene ID: MGYG000004188_02187
Location and strand information: 47343 - 47777 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004188_18|CGC1
Gene ID: MGYG000004188_02188
Location and strand information: 48037 - 51981 (-)
Family: HTH_8+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004188_18|CGC1
Gene ID: MGYG000004188_02189
Location and strand information: 52077 - 52832 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000004188_18|CGC1
Gene ID: MGYG000004188_02190
Location and strand information: 52910 - 53653 (+)
Family: 3.A.1.27.2
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000004188_18|CGC1
Gene ID: MGYG000004188_02191
Location and strand information: 53685 - 54455 (+)
Family: 3.A.1.27.4
Protein type: TC
Protein description: putative ribonucleotide transport ATP-binding protein mkl

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004188_02183	TonB-dependent receptor SusC	TC	37039	40242	-	1.B.14.6.1
MGYG000004188_02184	hypothetical protein	null	40768	42300	+	M60-like_N\| Peptidase_M60
MGYG000004188_02185	hypothetical protein	CAZyme	42318	45275	+	PL35
MGYG000004188_02186	hypothetical protein	CAZyme	45332	47473	+	GH141
MGYG000004188_02187	hypothetical protein	null	47343	47777	-	No domain
MGYG000004188_02188	Sensor histidine kinase RcsC	TF	48037	51981	-	HTH_8+HTH_AraC
MGYG000004188_02189	Lipopolysaccharide export system ATP-binding protein LptB	TC	52077	52832	-	1.B.42.1.2
MGYG000004188_02190	putative phospholipid ABC transporter permease protein MlaE	TC	52910	53653	+	3.A.1.27.2
MGYG000004188_02191	putative ribonucleotide transport ATP-binding protein mkl	TC	53685	54455	+	3.A.1.27.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature