dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00123
Location and strand information: 6317 - 12736 (-)
Family: GH20|GH101|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2328
Protein molecular weight: 235640.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00124
Location and strand information: 13005 - 14987 (-)
Family: 3.A.1.5.25
Protein type: TC
Protein description: Oligopeptide-binding protein SarA

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00125
Location and strand information: 15295 - 16347 (-)
Family: GT113
Protein type: CAZyme
Protein description: Beta-1,6-galactofuranosyltransferase WbbI
Protein isoelectric point: 8.697
Protein molecular weight: 39675.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00126
Location and strand information: 16372 - 17469 (-)
Family: Pyr_redox
Protein type: STP
Protein description: UDP-galactopyranose mutase

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00127
Location and strand information: 17603 - 18751 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00128
Location and strand information: 18931 - 20346 (-)
Family: 2.A.66.2.16
Protein type: TC
Protein description: Putative O-antigen transporter

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00129
Location and strand information: 20353 - 21318 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 7.4141
Protein molecular weight: 37020.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00130
Location and strand information: 21318 - 22412 (-)
Family: GT0
Protein type: CAZyme
Protein description: UDP-N-acetylglucosamine 2-epimerase
Protein isoelectric point: 5.084
Protein molecular weight: 41031.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00131
Location and strand information: 22409 - 23494 (-)
Family: GT4
Protein type: CAZyme
Protein description: Glycosyltransferase Gtf1
Protein isoelectric point: 7.2473
Protein molecular weight: 40944.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00132
Location and strand information: 23469 - 24209 (-)
Family: GT26
Protein type: CAZyme
Protein description: UDP-N-acetyl-D-mannosaminuronic acid transferase
Protein isoelectric point: 5.2442
Protein molecular weight: 28428.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00133
Location and strand information: 24211 - 24996 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00134
Location and strand information: 25001 - 26368 (-)
Family: 9.B.18.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00135
Location and strand information: 26391 - 27074 (-)
Family: 8.A.3.2.2
Protein type: TC
Protein description: Tyrosine-protein kinase CpsD

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00136
Location and strand information: 27084 - 27776 (-)
Family: 8.A.3.2.3
Protein type: TC
Protein description: putative capsular polysaccharide biosynthesis protein YwqC

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00137
Location and strand information: 27785 - 28516 (-)
Family: null
Protein type: null
Protein description: Tyrosine-protein phosphatase CpsB

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00138
Location and strand information: 28518 - 29963 (-)
Family: null
Protein type: null
Protein description: Transcriptional regulator LytR

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00139
Location and strand information: 30155 - 32116 (-)
Family: 3.A.1.5.19
Protein type: TC
Protein description: Oligopeptide-binding protein SarA

Gene clsuter ID: MGYG000004266_4|CGC1
Gene ID: MGYG000004266_00140
Location and strand information: 32265 - 34028 (-)
Family: 3.A.1.5.25
Protein type: TC
Protein description: Oligopeptide-binding protein SarA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004266_00123	hypothetical protein	CAZyme	6317	12736	-	GH20\| GH101\| CBM32
MGYG000004266_00124	Oligopeptide-binding protein SarA	TC	13005	14987	-	3.A.1.5.25
MGYG000004266_00125	Beta-1,6-galactofuranosyltransferase WbbI	CAZyme	15295	16347	-	GT113
MGYG000004266_00126	UDP-galactopyranose mutase	STP	16372	17469	-	Pyr_redox
MGYG000004266_00127	hypothetical protein	null	17603	18751	-	No domain
MGYG000004266_00128	Putative O-antigen transporter	TC	18931	20346	-	2.A.66.2.16
MGYG000004266_00129	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	20353	21318	-	GT2
MGYG000004266_00130	UDP-N-acetylglucosamine 2-epimerase	CAZyme	21318	22412	-	GT0
MGYG000004266_00131	Glycosyltransferase Gtf1	CAZyme	22409	23494	-	GT4
MGYG000004266_00132	UDP-N-acetyl-D-mannosaminuronic acid transferase	CAZyme	23469	24209	-	GT26
MGYG000004266_00133	hypothetical protein	null	24211	24996	-	LicD
MGYG000004266_00134	hypothetical protein	TC	25001	26368	-	9.B.18.1.2
MGYG000004266_00135	Tyrosine-protein kinase CpsD	TC	26391	27074	-	8.A.3.2.2
MGYG000004266_00136	putative capsular polysaccharide biosynthesis protein YwqC	TC	27084	27776	-	8.A.3.2.3
MGYG000004266_00137	Tyrosine-protein phosphatase CpsB	null	27785	28516	-	CpsB_CapC
MGYG000004266_00138	Transcriptional regulator LytR	null	28518	29963	-	DNA_PPF\| LytR_cpsA_psr
MGYG000004266_00139	Oligopeptide-binding protein SarA	TC	30155	32116	-	3.A.1.5.19
MGYG000004266_00140	Oligopeptide-binding protein SarA	TC	32265	34028	-	3.A.1.5.25
Protein ID	Protein Name	Type	Start	End	Strand	Signature