logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000004340_36|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000004340_01006
C4-dicarboxylate TRAP transporter large permease protein DctM
TC 10 654 + 2.A.56.1.5
MGYG000004340_01007
hypothetical protein
CAZyme 679 2052 + GH28
MGYG000004340_01008
hypothetical protein
null 2145 3314 + MFS_1
MGYG000004340_01009
Beta-glucuronidase
CAZyme 3531 4823 + GH2
MGYG000004340_01010
Unsaturated chondroitin disaccharide hydrolase
CAZyme 4834 5994 + GH88
MGYG000004340_01011
hypothetical protein
CAZyme 5994 7685 + GH154
MGYG000004340_01012
Beta-galactosidase
CAZyme 7672 10695 + GH2
MGYG000004340_01013
hypothetical protein
null 11345 11653 - DUF3847
MGYG000004340_01014
HTH-type transcriptional regulator DegA
TF 12060 13124 + LacI
MGYG000004340_01015
Oligosaccharide 4-alpha-D-glucosyltransferase
CAZyme 13424 15382 + GH31
MGYG000004340_01016
Oligo-1,6-glucosidase
CAZyme 15395 17053 + GH13| GH13_31
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is starch

Protein ID eCAMI subfam CAZyme substrate
MGYG000004340_01007 GH28_e40
MGYG000004340_01009 GH2_e0|3.2.1.31 beta-glucuronan
MGYG000004340_01010 GH88_e1
MGYG000004340_01011
MGYG000004340_01012 GH2_e40|3.2.1.23 beta-galactan
MGYG000004340_01015 GH31_e49|3.2.1.20 starch
MGYG000004340_01016 GH13_e0|5.4.99.11|3.2.1.70|3.2.1.20|3.2.1.10|3.2.1.-|2.4.1.- sucrose|starch

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location