dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01118
Location and strand information: 52136 - 53164 (-)
Family: 9.A.23.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01119
Location and strand information: 53549 - 53818 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01120
Location and strand information: 53824 - 54936 (+)
Family: 2.A.45.2.6
Protein type: TC
Protein description: Inner membrane protein YbiR

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01121
Location and strand information: 55028 - 55195 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01122
Location and strand information: 55274 - 55642 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01123
Location and strand information: 55798 - 56955 (-)
Family: 2.A.4.7.4
Protein type: TC
Protein description: Ferrous-iron efflux pump FieF

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01124
Location and strand information: 56973 - 58439 (-)
Family: GGDEF
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01125
Location and strand information: 58626 - 59804 (-)
Family: null
Protein type: null
Protein description: Trigger factor

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01126
Location and strand information: 59941 - 61293 (-)
Family: 3.A.24.3.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01127
Location and strand information: 61349 - 61777 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01128
Location and strand information: 61944 - 64091 (-)
Family: GH112
Protein type: CAZyme
Protein description: D-galactosyl-beta-1->4-L-rhamnose phosphorylase
Protein isoelectric point: 4.8375
Protein molecular weight: 81018.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01129
Location and strand information: 64120 - 65172 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.9115
Protein molecular weight: 39483.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01130
Location and strand information: 65336 - 67081 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01131
Location and strand information: 67190 - 68116 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01132
Location and strand information: 68130 - 69089 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01133
Location and strand information: 69424 - 70347 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004369_12|CGC1
Gene ID: MGYG000004369_01134
Location and strand information: 70808 - 72772 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8803
Protein molecular weight: 73366.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004369_01118	hypothetical protein	TC	52136	53164	-	9.A.23.1.1
MGYG000004369_01119	hypothetical protein	null	53549	53818	+	No domain
MGYG000004369_01120	Inner membrane protein YbiR	TC	53824	54936	+	2.A.45.2.6
MGYG000004369_01121	hypothetical protein	null	55028	55195	-	No domain
MGYG000004369_01122	hypothetical protein	null	55274	55642	-	No domain
MGYG000004369_01123	Ferrous-iron efflux pump FieF	TC	55798	56955	-	2.A.4.7.4
MGYG000004369_01124	hypothetical protein	STP	56973	58439	-	GGDEF
MGYG000004369_01125	Trigger factor	null	58626	59804	-	FKBP_C\| Trigger_C
MGYG000004369_01126	hypothetical protein	TC	59941	61293	-	3.A.24.3.1
MGYG000004369_01127	hypothetical protein	null	61349	61777	-	HIT
MGYG000004369_01128	D-galactosyl-beta-1->4-L-rhamnose phosphorylase	CAZyme	61944	64091	-	GH112
MGYG000004369_01129	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	64120	65172	-	GH105
MGYG000004369_01130	hypothetical protein	null	65336	67081	-	No domain
MGYG000004369_01131	hypothetical protein	TC	67190	68116	-	3.A.1.1.29
MGYG000004369_01132	putative multiple-sugar transport system permease YteP	TC	68130	69089	-	3.A.1.1.10
MGYG000004369_01133	HTH-type transcriptional activator RhaS	TF	69424	70347	+	HTH_AraC+HTH_AraC
MGYG000004369_01134	hypothetical protein	CAZyme	70808	72772	+	CE12
Protein ID	Protein Name	Type	Start	End	Strand	Signature