dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01070
Location and strand information: 16138 - 17115 (+)
Family: CBM88|GH43_19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5505
Protein molecular weight: 37237.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01071
Location and strand information: 17502 - 21422 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01072
Location and strand information: 21777 - 23240 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01073
Location and strand information: 23277 - 26294 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01074
Location and strand information: 26344 - 27960 (+)
Family: TPR_2
Protein type: STP
Protein description: SusD-like protein

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01075
Location and strand information: 28195 - 29952 (+)
Family: GH30_4|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0722
Protein molecular weight: 64842.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01076
Location and strand information: 29976 - 31538 (+)
Family: GH30_4|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5706
Protein molecular weight: 58264.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01077
Location and strand information: 31632 - 34004 (+)
Family: CBM32|GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.096
Protein molecular weight: 88640.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01078
Location and strand information: 34886 - 36451 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01079
Location and strand information: 36551 - 38518 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.5668
Protein molecular weight: 74237.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01080
Location and strand information: 38764 - 38946 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01081
Location and strand information: 39004 - 40911 (+)
Family: GH43_29|GH43|GH43_34
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6513
Protein molecular weight: 71322.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01082
Location and strand information: 40930 - 43008 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 7.6736
Protein molecular weight: 77156.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01083
Location and strand information: 43244 - 44176 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01084
Location and strand information: 44716 - 46455 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01085
Location and strand information: 46573 - 48849 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 6.5183
Protein molecular weight: 83529.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01086
Location and strand information: 48862 - 49941 (-)
Family: GH16_3|GH16|3.2.1.39
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.762
Protein molecular weight: 39548.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01087
Location and strand information: 49957 - 51828 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01088
Location and strand information: 51851 - 53377 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01089
Location and strand information: 53430 - 56549 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004390_15|CGC1
Gene ID: MGYG000004390_01090
Location and strand information: 56602 - 58899 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3A
Protein isoelectric point: 6.774
Protein molecular weight: 85339.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004390_01070
MGYG000004390_01075	GH30_e7\|3.2.1.38	beta-fucosides
MGYG000004390_01076	GH30_e50\|3.2.1.38	beta-fucosides
MGYG000004390_01077	GH35_e29\|CBM32_e73
MGYG000004390_01079	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000004390_01081	GH43_e38\|3.2.1.55	xylan
MGYG000004390_01082	GH127_e7
MGYG000004390_01085	GH3_e0\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan
MGYG000004390_01086	GH16_e179
MGYG000004390_01090	GH3_e134\|3.2.1.21	beta-glucan

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-fucosides|xylan|beta-glucan

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004390_01070	hypothetical protein	CAZyme	16138	17115	+	CBM88\| GH43_19
MGYG000004390_01071	Sensor histidine kinase RcsC	TF	17502	21422	+	HTH_AraC
MGYG000004390_01072	hypothetical protein	null	21777	23240	+	No domain
MGYG000004390_01073	hypothetical protein	TC	23277	26294	+	1.B.14.6.1
MGYG000004390_01074	SusD-like protein	STP	26344	27960	+	TPR_2
MGYG000004390_01075	hypothetical protein	CAZyme	28195	29952	+	GH30_4\| GH30
MGYG000004390_01076	hypothetical protein	CAZyme	29976	31538	+	GH30_4\| GH30
MGYG000004390_01077	hypothetical protein	CAZyme	31632	34004	+	CBM32\| GH35
MGYG000004390_01078	hypothetical protein	null	34886	36451	+	AAA-ATPase_like\| PDDEXK_9
MGYG000004390_01079	Retaining alpha-galactosidase	CAZyme	36551	38518	-	GH97
MGYG000004390_01080	hypothetical protein	null	38764	38946	+	No domain
MGYG000004390_01081	hypothetical protein	CAZyme	39004	40911	+	GH43_29\| GH43\| GH43_34
MGYG000004390_01082	Non-reducing end beta-L-arabinofuranosidase	CAZyme	40930	43008	+	GH127
MGYG000004390_01083	hypothetical protein	null	43244	44176	-	PDDEXK_2
MGYG000004390_01084	hypothetical protein	null	44716	46455	-	DUF6377
MGYG000004390_01085	Beta-glucosidase BoGH3B	CAZyme	46573	48849	-	GH3
MGYG000004390_01086	hypothetical protein	CAZyme	48862	49941	-	GH16_3\| GH16\| 3.2.1.39
MGYG000004390_01087	hypothetical protein	null	49957	51828	-	No domain
MGYG000004390_01088	SusD-like protein	null	51851	53377	-	SusD-like_3\| SusD_RagB
MGYG000004390_01089	TonB-dependent receptor SusC	TC	53430	56549	-	1.B.14.6.1
MGYG000004390_01090	Beta-glucosidase BoGH3A	CAZyme	56602	58899	-	GH3
Protein ID	Protein Name	Type	Start	End	Strand	Signature