dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02152
Location and strand information: 16066 - 17421 (+)
Family: 2.A.66.1.33
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02153
Location and strand information: 17624 - 18148 (+)
Family: Spo0A_C
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02154
Location and strand information: 18266 - 21187 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9077
Protein molecular weight: 111999.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02155
Location and strand information: 21212 - 24682 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.9543
Protein molecular weight: 132104.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02156
Location and strand information: 24808 - 25275 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02157
Location and strand information: 25317 - 26390 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02158
Location and strand information: 26590 - 27630 (+)
Family: GH53
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 4.7571
Protein molecular weight: 39242.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02159
Location and strand information: 27689 - 28633 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02160
Location and strand information: 28647 - 29552 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02161
Location and strand information: 29582 - 31246 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02162
Location and strand information: 31330 - 32304 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor PurR

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02163
Location and strand information: 32337 - 34748 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 4.9877
Protein molecular weight: 90944.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02164
Location and strand information: 34784 - 35650 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02165
Location and strand information: 35991 - 38150 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-hexosaminidase
Protein isoelectric point: 5.0826
Protein molecular weight: 79748.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02166
Location and strand information: 38192 - 39136 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000004431_25|CGC1
Gene ID: MGYG000004431_02167
Location and strand information: 39152 - 40057 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004431_02154	GH115_e2\|3.2.1.131	xylan
MGYG000004431_02155	GH2_e103\|3.2.1.23	beta-galactan
MGYG000004431_02158	GH53_e0
MGYG000004431_02163
MGYG000004431_02165	GH3_e159\|3.2.1.55\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan\|arabinan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004431_02152	hypothetical protein	TC	16066	17421	+	2.A.66.1.33
MGYG000004431_02153	hypothetical protein	STP	17624	18148	+	Spo0A_C
MGYG000004431_02154	hypothetical protein	CAZyme	18266	21187	+	GH115
MGYG000004431_02155	Beta-galactosidase	CAZyme	21212	24682	+	GH2
MGYG000004431_02156	hypothetical protein	null	24808	25275	+	No domain
MGYG000004431_02157	HTH-type transcriptional activator RhaS	TF	25317	26390	-	HTH_AraC
MGYG000004431_02158	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	26590	27630	+	GH53
MGYG000004431_02159	putative multiple-sugar transport system permease YteP	TC	27689	28633	+	3.A.1.1.10
MGYG000004431_02160	L-arabinose transport system permease protein AraQ	TC	28647	29552	+	3.A.1.1.29
MGYG000004431_02161	hypothetical protein	null	29582	31246	+	DUF3502
MGYG000004431_02162	HTH-type transcriptional repressor PurR	TF	31330	32304	+	LacI
MGYG000004431_02163	Beta-galactosidase BoGH2A	CAZyme	32337	34748	+	GH2
MGYG000004431_02164	HTH-type transcriptional activator RhaR	TF	34784	35650	-	HTH_AraC+HTH_AraC
MGYG000004431_02165	Beta-hexosaminidase	CAZyme	35991	38150	+	GH3
MGYG000004431_02166	putative multiple-sugar transport system permease YteP	TC	38192	39136	+	3.A.1.1.10
MGYG000004431_02167	L-arabinose transport system permease protein AraQ	TC	39152	40057	+	3.A.1.1.29
Protein ID	Protein Name	Type	Start	End	Strand	Signature