dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00283
Location and strand information: 69685 - 71793 (+)
Family: PL10|CE0|CE8|PL10_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.6839
Protein molecular weight: 80089.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00284
Location and strand information: 71818 - 75057 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00285
Location and strand information: 75079 - 77253 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00286
Location and strand information: 77315 - 80170 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00287
Location and strand information: 80341 - 82800 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 7.878
Protein molecular weight: 92489.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00288
Location and strand information: 82889 - 83965 (-)
Family: GH53
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 5.1075
Protein molecular weight: 39702.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00289
Location and strand information: 84316 - 86655 (-)
Family: PL1|CBM77
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5301
Protein molecular weight: 83866.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00290
Location and strand information: 86673 - 87032 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00293
Location and strand information: 87554 - 88498 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00294
Location and strand information: 88600 - 89955 (-)
Family: 2.A.22.5.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_2|CGC2
Gene ID: MGYG000004456_00295
Location and strand information: 90030 - 91394 (-)
Family: 2.A.22.5.3
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004456_00283	hypothetical protein	CAZyme	69685	71793	+	PL10\| CE0\| CE8\| PL10_1
MGYG000004456_00284	hypothetical protein	TC	71818	75057	+	1.B.14.6.1
MGYG000004456_00285	hypothetical protein	null	75079	77253	+	SusD_RagB
MGYG000004456_00286	HTH-type transcriptional activator RhaR	TF	77315	80170	-	HTH_AraC
MGYG000004456_00287	Beta-galactosidase BoGH2A	CAZyme	80341	82800	-	GH2
MGYG000004456_00288	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	82889	83965	-	GH53
MGYG000004456_00289	hypothetical protein	CAZyme	84316	86655	-	PL1\| CBM77
MGYG000004456_00290	hypothetical protein	null	86673	87032	-	No domain
MGYG000004456_00293	hypothetical protein	null	87554	88498	+	HHH_3\| HHH_3\| HHH_3
MGYG000004456_00294	hypothetical protein	TC	88600	89955	-	2.A.22.5.3
MGYG000004456_00295	hypothetical protein	TC	90030	91394	-	2.A.22.5.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature