dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004548_7|CGC1
Gene ID: MGYG000004548_00687
Location and strand information: 13974 - 15191 (+)
Family: 2.A.66.1.28
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004548_7|CGC1
Gene ID: MGYG000004548_00688
Location and strand information: 15270 - 18245 (+)
Family: GH3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2095
Protein molecular weight: 108709.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004548_7|CGC1
Gene ID: MGYG000004548_00689
Location and strand information: 18390 - 19100 (+)
Family: LytTR
Protein type: TF
Protein description: Transcriptional regulatory protein YpdB

Gene clsuter ID: MGYG000004548_7|CGC1
Gene ID: MGYG000004548_00690
Location and strand information: 19102 - 20391 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004548_7|CGC1
Gene ID: MGYG000004548_00691
Location and strand information: 20515 - 22590 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.5027
Protein molecular weight: 78902.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004548_7|CGC1
Gene ID: MGYG000004548_00692
Location and strand information: 22619 - 24136 (+)
Family: 2.A.2.3.2
Protein type: TC
Protein description: Putative glycoside/cation symporter YagG

Gene clsuter ID: MGYG000004548_7|CGC1
Gene ID: MGYG000004548_00693
Location and strand information: 24343 - 27333 (+)
Family: HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004548_7|CGC1
Gene ID: MGYG000004548_00694
Location and strand information: 27346 - 28119 (+)
Family: Response_reg
Protein type: STP
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000004548_7|CGC1
Gene ID: MGYG000004548_00695
Location and strand information: 28116 - 29201 (-)
Family: 8.A.59.4.2
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004548_00687	hypothetical protein	TC	13974	15191	+	2.A.66.1.28
MGYG000004548_00688	hypothetical protein	CAZyme	15270	18245	+	GH3
MGYG000004548_00689	Transcriptional regulatory protein YpdB	TF	18390	19100	+	LytTR
MGYG000004548_00690	hypothetical protein	null	19102	20391	+	HATPase_c_5
MGYG000004548_00691	Beta-galactosidase	CAZyme	20515	22590	+	GH2
MGYG000004548_00692	Putative glycoside/cation symporter YagG	TC	22619	24136	+	2.A.2.3.2
MGYG000004548_00693	Sensor histidine kinase RcsC	STP	24343	27333	+	HisKA\| HATPase_c\| Response_reg
MGYG000004548_00694	Chemotaxis response regulator protein-glutamate methylesterase	STP	27346	28119	+	Response_reg
MGYG000004548_00695	hypothetical protein	TC	28116	29201	-	8.A.59.4.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature