dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00746
Location and strand information: 51837 - 53147 (+)
Family: 3.A.1.26.3
Protein type: TC
Protein description: Putative HMP/thiamine import ATP-binding protein YkoD

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00747
Location and strand information: 53140 - 53901 (+)
Family: 3.A.1.25.4
Protein type: TC
Protein description: Energy-coupling factor transporter transmembrane protein EcfT

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00748
Location and strand information: 53940 - 54734 (+)
Family: null
Protein type: null
Protein description: tRNA pseudouridine synthase A

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00749
Location and strand information: 55021 - 55923 (+)
Family: 2.A.119.2.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00750
Location and strand information: 55954 - 56733 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00751
Location and strand information: 56862 - 57929 (+)
Family: GT2
Protein type: CAZyme
Protein description: putative glycosyltransferase EpsJ
Protein isoelectric point: 5.467
Protein molecular weight: 37878.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00752
Location and strand information: 57931 - 59046 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7227
Protein molecular weight: 40532.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00753
Location and strand information: 59135 - 60127 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3962
Protein molecular weight: 37239.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00754
Location and strand information: 60176 - 61465 (+)
Family: Fer4+Fer4+Fer4
Protein type: STP
Protein description: Electron transport complex subunit RsxB

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00755
Location and strand information: 61513 - 62589 (+)
Family: null
Protein type: null
Protein description: Ribosome-binding ATPase YchF

Gene clsuter ID: MGYG000004567_4|CGC1
Gene ID: MGYG000004567_00756
Location and strand information: 62636 - 63805 (+)
Family: 3.A.24.3.1
Protein type: TC
Protein description: Holliday junction ATP-dependent DNA helicase RuvB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004567_00746	Putative HMP/thiamine import ATP-binding protein YkoD	TC	51837	53147	+	3.A.1.26.3
MGYG000004567_00747	Energy-coupling factor transporter transmembrane protein EcfT	TC	53140	53901	+	3.A.1.25.4
MGYG000004567_00748	tRNA pseudouridine synthase A	null	53940	54734	+	PseudoU_synth_1
MGYG000004567_00749	hypothetical protein	TC	55021	55923	+	2.A.119.2.2
MGYG000004567_00750	hypothetical protein	null	55954	56733	+	No domain
MGYG000004567_00751	putative glycosyltransferase EpsJ	CAZyme	56862	57929	+	GT2
MGYG000004567_00752	hypothetical protein	CAZyme	57931	59046	-	GT2
MGYG000004567_00753	hypothetical protein	CAZyme	59135	60127	+	GT2
MGYG000004567_00754	Electron transport complex subunit RsxB	STP	60176	61465	+	Fer4\| Fer4\| Fer4
MGYG000004567_00755	Ribosome-binding ATPase YchF	null	61513	62589	+	MMR_HSR1\| YchF-GTPase_C
MGYG000004567_00756	Holliday junction ATP-dependent DNA helicase RuvB	TC	62636	63805	+	3.A.24.3.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature