dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00092
Location and strand information: 55205 - 56221 (-)
Family: 3.A.1.2.15
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00093
Location and strand information: 56205 - 57716 (-)
Family: 3.A.1.2.20
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00094
Location and strand information: 58342 - 58860 (-)
Family: Nitroreductase+Nitroreductase
Protein type: STP
Protein description: malonic semialdehyde reductase RutE

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00095
Location and strand information: 59094 - 60701 (-)
Family: GH43|GH43_11
Protein type: CAZyme
Protein description: Beta-xylosidase
Protein isoelectric point: 4.5604
Protein molecular weight: 61036.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00096
Location and strand information: 60904 - 61881 (-)
Family: GH43|GH43_1
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.5163
Protein molecular weight: 36696.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00097
Location and strand information: 61977 - 64106 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-hexosaminidase
Protein isoelectric point: 5.5614
Protein molecular weight: 78277.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00098
Location and strand information: 64257 - 65027 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00099
Location and strand information: 65199 - 65912 (+)
Family: HTH_6
Protein type: TF
Protein description: HTH-type transcriptional regulator MurR

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00100
Location and strand information: 66139 - 67680 (+)
Family: 4.A.1.1.3
Protein type: TC
Protein description: PTS system maltose-specific EIICB component

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00101
Location and strand information: 67702 - 69039 (+)
Family: GH4
Protein type: CAZyme
Protein description: Phospho-alpha-glucosidase PagL
Protein isoelectric point: 5.4138
Protein molecular weight: 50944.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00102
Location and strand information: 69477 - 69737 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00103
Location and strand information: 69947 - 70105 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004667_11|CGC1
Gene ID: MGYG000004667_00104
Location and strand information: 70439 - 71887 (-)
Family: 2.A.1.3.17
Protein type: TC
Protein description: Riboflavin transporter RibZ

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004667_00095	GH43_e0\|3.2.1.55\|3.2.1.37\|3.2.1.-	xylan
MGYG000004667_00096	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000004667_00097	GH3_e159\|3.2.1.55\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan\|arabinan
MGYG000004667_00101	GH4_e17\|3.2.1.122	sucrose

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004667_00092	Ribose import permease protein RbsC	TC	55205	56221	-	3.A.1.2.15
MGYG000004667_00093	Ribose import ATP-binding protein RbsA	TC	56205	57716	-	3.A.1.2.20
MGYG000004667_00094	malonic semialdehyde reductase RutE	STP	58342	58860	-	Nitroreductase\| Nitroreductase
MGYG000004667_00095	Beta-xylosidase	CAZyme	59094	60701	-	GH43\| GH43_11
MGYG000004667_00096	Xylosidase/arabinosidase	CAZyme	60904	61881	-	GH43\| GH43_1
MGYG000004667_00097	Beta-hexosaminidase	CAZyme	61977	64106	-	GH3
MGYG000004667_00098	HTH-type transcriptional activator RhaS	TF	64257	65027	+	HTH_AraC+HTH_AraC
MGYG000004667_00099	HTH-type transcriptional regulator MurR	TF	65199	65912	+	HTH_6
MGYG000004667_00100	PTS system maltose-specific EIICB component	TC	66139	67680	+	4.A.1.1.3
MGYG000004667_00101	Phospho-alpha-glucosidase PagL	CAZyme	67702	69039	+	GH4
Protein ID	Protein Name	Type	Start	End	Strand	Signature