dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00349
Location and strand information: 11517 - 12401 (+)
Family: 3.A.1.1.37
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjO

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00350
Location and strand information: 12431 - 13261 (+)
Family: 3.A.1.1.41
Protein type: TC
Protein description: Trehalose transport system permease protein SugB

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00351
Location and strand information: 13280 - 14764 (+)
Family: GH32
Protein type: CAZyme
Protein description: Sucrose-6-phosphate hydrolase
Protein isoelectric point: 4.851
Protein molecular weight: 57626.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00352
Location and strand information: 14783 - 16123 (+)
Family: GH91
Protein type: CAZyme
Protein description: Inulin fructotransferase [DFA-I-forming]
Protein isoelectric point: 4.6912
Protein molecular weight: 49161.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00353
Location and strand information: 16554 - 17411 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00354
Location and strand information: 17731 - 19026 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: Multiple sugar-binding protein

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00355
Location and strand information: 19112 - 19999 (+)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00356
Location and strand information: 20012 - 20860 (+)
Family: 3.A.1.1.18
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00357
Location and strand information: 20872 - 22980 (+)
Family: GH3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8485
Protein molecular weight: 78032.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00358
Location and strand information: 23019 - 24584 (+)
Family: GH43_12
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 5.2219
Protein molecular weight: 59579.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00359
Location and strand information: 24650 - 25570 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00360
Location and strand information: 25648 - 27198 (-)
Family: 3.A.1.121.4
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YbiT

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00361
Location and strand information: 27538 - 28689 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00362
Location and strand information: 28820 - 30172 (+)
Family: 2.A.66.1.28
Protein type: TC
Protein description: Multidrug resistance protein MdtK

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00363
Location and strand information: 30280 - 30765 (+)
Family: MarR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00364
Location and strand information: 30749 - 35221 (+)
Family: 2.A.6.3.6
Protein type: TC
Protein description: Multidrug resistance protein MdtC

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00365
Location and strand information: 35366 - 36208 (+)
Family: 3.A.1.132.3
Protein type: TC
Protein description: Iron-sulfur cluster carrier protein

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00366
Location and strand information: 36350 - 37177 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00367
Location and strand information: 37188 - 37361 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00368
Location and strand information: 37666 - 39603 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 5.0271
Protein molecular weight: 72289.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00369
Location and strand information: 39652 - 41004 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00370
Location and strand information: 41080 - 41991 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00371
Location and strand information: 41994 - 42836 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00372
Location and strand information: 42867 - 43688 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00373
Location and strand information: 43642 - 44661 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000004712_6|CGC1
Gene ID: MGYG000004712_00374
Location and strand information: 44658 - 46166 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.9435
Protein molecular weight: 57602.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004712_00351	GH32_e90
MGYG000004712_00352	GH91_e0\|4.2.2.18\|4.2.2.17\|3.2.1.-	fructan
MGYG000004712_00357	GH3_e159\|3.2.1.55\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan\|arabinan
MGYG000004712_00358
MGYG000004712_00368	GH127_e0\|3.2.1.185	arabinogalactan
MGYG000004712_00374	GH51_e0\|3.2.1.55	arabinan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004712_00349	Inner membrane ABC transporter permease protein YcjO	TC	11517	12401	+	3.A.1.1.37
MGYG000004712_00350	Trehalose transport system permease protein SugB	TC	12431	13261	+	3.A.1.1.41
MGYG000004712_00351	Sucrose-6-phosphate hydrolase	CAZyme	13280	14764	+	GH32
MGYG000004712_00352	Inulin fructotransferase [DFA-I-forming]	CAZyme	14783	16123	+	GH91
MGYG000004712_00353	HTH-type transcriptional activator RhaS	TF	16554	17411	-	HTH_AraC+HTH_AraC
MGYG000004712_00354	Multiple sugar-binding protein	STP	17731	19026	+	SBP_bac_1
MGYG000004712_00355	Lactose transport system permease protein LacF	TC	19112	19999	+	3.A.1.1.4
MGYG000004712_00356	L-arabinose transport system permease protein AraQ	TC	20012	20860	+	3.A.1.1.18
MGYG000004712_00357	hypothetical protein	CAZyme	20872	22980	+	GH3
MGYG000004712_00358	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	23019	24584	+	GH43_12
MGYG000004712_00359	hypothetical protein	null	24650	25570	+	Lactamase_B
MGYG000004712_00360	putative ABC transporter ATP-binding protein YbiT	TC	25648	27198	-	3.A.1.121.4
MGYG000004712_00361	hypothetical protein	null	27538	28689	+	GFO_IDH_MocA\| GFO_IDH_MocA_C
MGYG000004712_00362	Multidrug resistance protein MdtK	TC	28820	30172	+	2.A.66.1.28
MGYG000004712_00363	hypothetical protein	TF	30280	30765	+	MarR
MGYG000004712_00364	Multidrug resistance protein MdtC	TC	30749	35221	+	2.A.6.3.6
MGYG000004712_00365	Iron-sulfur cluster carrier protein	TC	35366	36208	+	3.A.1.132.3
MGYG000004712_00366	hypothetical protein	null	36350	37177	-	Lysozyme_like
MGYG000004712_00367	hypothetical protein	null	37188	37361	-	No domain
MGYG000004712_00368	Non-reducing end beta-L-arabinofuranosidase	CAZyme	37666	39603	+	GH127
MGYG000004712_00369	hypothetical protein	STP	39652	41004	+	SBP_bac_1
MGYG000004712_00370	Lactose transport system permease protein LacF	TC	41080	41991	+	3.A.1.1.11
MGYG000004712_00371	Inner membrane ABC transporter permease protein YcjP	TC	41994	42836	+	3.A.1.1.11
MGYG000004712_00372	hypothetical protein	null	42867	43688	+	No domain
MGYG000004712_00373	HTH-type transcriptional repressor CytR	TF	43642	44661	+	LacI
MGYG000004712_00374	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	44658	46166	+	GH51
Protein ID	Protein Name	Type	Start	End	Strand	Signature