dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00196
Location and strand information: 243275 - 246436 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00197
Location and strand information: 246458 - 248263 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00198
Location and strand information: 248431 - 250893 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00199
Location and strand information: 251120 - 252595 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00200
Location and strand information: 252610 - 255726 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00201
Location and strand information: 255982 - 257541 (-)
Family: GH88|PL29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8142
Protein molecular weight: 58813.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00202
Location and strand information: 257548 - 259824 (-)
Family: GH95|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6655
Protein molecular weight: 85976.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00203
Location and strand information: 259935 - 262100 (-)
Family: PL8_3|PL8
Protein type: CAZyme
Protein description: Chondroitinase-AC
Protein isoelectric point: 7.9228
Protein molecular weight: 82363.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00204
Location and strand information: 262097 - 263401 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.604
Protein molecular weight: 49216.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00205
Location and strand information: 263427 - 264575 (-)
Family: PL38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1348
Protein molecular weight: 43973.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00206
Location and strand information: 264595 - 267042 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.5516
Protein molecular weight: 92997.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00207
Location and strand information: 267061 - 268287 (-)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 5.7921
Protein molecular weight: 46822.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00208
Location and strand information: 268309 - 270309 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4929
Protein molecular weight: 75643.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00209
Location and strand information: 270423 - 274514 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00210
Location and strand information: 274673 - 275809 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.0523
Protein molecular weight: 43127.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004748_1|CGC2
Gene ID: MGYG000004748_00211
Location and strand information: 276190 - 278589 (-)
Family: 9.B.14.3.1
Protein type: TC
Protein description: Cytochrome c biogenesis protein CcsA

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004748_00196	TonB-dependent receptor SusC	TC	243275	246436	+	1.B.14.6.1
MGYG000004748_00197	hypothetical protein	TC	246458	248263	+	8.A.46.1.3
MGYG000004748_00198	hypothetical protein	null	248431	250893	+	No domain
MGYG000004748_00199	hypothetical protein	null	251120	252595	-	SusD-like_3\| SusD_RagB
MGYG000004748_00200	TonB-dependent receptor SusC	TC	252610	255726	-	1.B.14.6.1
MGYG000004748_00201	hypothetical protein	CAZyme	255982	257541	-	GH88\| PL29
MGYG000004748_00202	hypothetical protein	CAZyme	257548	259824	-	GH95\| CBM32
MGYG000004748_00203	Chondroitinase-AC	CAZyme	259935	262100	-	PL8_3\| PL8
MGYG000004748_00204	hypothetical protein	CAZyme	262097	263401	-	GH105
MGYG000004748_00205	hypothetical protein	CAZyme	263427	264575	-	PL38
MGYG000004748_00206	Beta-galactosidase	CAZyme	264595	267042	-	GH2
MGYG000004748_00207	Unsaturated chondroitin disaccharide hydrolase	CAZyme	267061	268287	-	GH88
MGYG000004748_00208	hypothetical protein	CAZyme	268309	270309	-	GH105
MGYG000004748_00209	Sensor histidine kinase RcsC	TF	270423	274514	-	HTH_AraC
MGYG000004748_00210	hypothetical protein	CAZyme	274673	275809	-	GH105
MGYG000004748_00211	Cytochrome c biogenesis protein CcsA	TC	276190	278589	-	9.B.14.3.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature