dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01958
Location and strand information: 3956 - 7252 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01959
Location and strand information: 7408 - 8406 (-)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01960
Location and strand information: 8467 - 9057 (-)
Family: GerE
Protein type: TF
Protein description: ECF RNA polymerase sigma factor SigW

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01961
Location and strand information: 9899 - 12055 (-)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 6.4295
Protein molecular weight: 82539.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01962
Location and strand information: 12243 - 13139 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator Btr

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01963
Location and strand information: 13152 - 15215 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01964
Location and strand information: 15222 - 17495 (-)
Family: GH3
Protein type: CAZyme
Protein description: Thermostable beta-glucosidase B
Protein isoelectric point: 5.394
Protein molecular weight: 83992.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01965
Location and strand information: 17507 - 20449 (-)
Family: GH2|CBM32
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.4217
Protein molecular weight: 111387.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01966
Location and strand information: 20479 - 21501 (-)
Family: null
Protein type: null
Protein description: Aldose 1-epimerase

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01967
Location and strand information: 21591 - 23210 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01968
Location and strand information: 23247 - 26300 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01969
Location and strand information: 26340 - 28367 (-)
Family: GH27|GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9514
Protein molecular weight: 76220.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01970
Location and strand information: 28574 - 32608 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01971
Location and strand information: 32689 - 34677 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.8435
Protein molecular weight: 75231.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01972
Location and strand information: 34674 - 38015 (-)
Family: TPR_2+TPR_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01973
Location and strand information: 38028 - 39422 (-)
Family: 2.A.1.1.55
Protein type: TC
Protein description: D-xylose-proton symporter

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01974
Location and strand information: 39609 - 42011 (-)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3051
Protein molecular weight: 88915.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01975
Location and strand information: 42131 - 44413 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0495
Protein molecular weight: 86513.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01976
Location and strand information: 44448 - 46646 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4696
Protein molecular weight: 83263.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01977
Location and strand information: 46913 - 48091 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004797_25|CGC1
Gene ID: MGYG000004797_01978
Location and strand information: 48099 - 49148 (-)
Family: 9.B.97.3.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is mucin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004797_01958	TonB-dependent receptor SusC	TC	3956	7252	-	1.B.14.6.1
MGYG000004797_01959	hypothetical protein	STP	7408	8406	-	FecR
MGYG000004797_01960	ECF RNA polymerase sigma factor SigW	TF	8467	9057	-	GerE
MGYG000004797_01961	Alpha-galactosidase AgaA	CAZyme	9899	12055	-	GH36
MGYG000004797_01962	HTH-type transcriptional activator Btr	TF	12243	13139	+	HTH_AraC+HTH_AraC
MGYG000004797_01963	hypothetical protein	null	13152	15215	-	SASA\| SASA
MGYG000004797_01964	Thermostable beta-glucosidase B	CAZyme	15222	17495	-	GH3
MGYG000004797_01965	Beta-galactosidase	CAZyme	17507	20449	-	GH2\| CBM32
MGYG000004797_01966	Aldose 1-epimerase	null	20479	21501	-	Aldose_epim
MGYG000004797_01967	hypothetical protein	null	21591	23210	-	SusD-like_3\| SusD_RagB
MGYG000004797_01968	TonB-dependent receptor SusC	TC	23247	26300	-	1.B.14.6.1
MGYG000004797_01969	hypothetical protein	CAZyme	26340	28367	-	GH27\| GH36
MGYG000004797_01970	Sensor histidine kinase RcsC	TF	28574	32608	-	HTH_AraC
MGYG000004797_01971	Retaining alpha-galactosidase	CAZyme	32689	34677	-	GH97
MGYG000004797_01972	hypothetical protein	STP	34674	38015	-	TPR_2\| TPR_1
MGYG000004797_01973	D-xylose-proton symporter	TC	38028	39422	-	2.A.1.1.55
MGYG000004797_01974	hypothetical protein	CAZyme	39609	42011	-	GH95
MGYG000004797_01975	hypothetical protein	CAZyme	42131	44413	-	GH92
MGYG000004797_01976	hypothetical protein	CAZyme	44448	46646	-	GH92
MGYG000004797_01977	hypothetical protein	null	46913	48091	-	DUF418
MGYG000004797_01978	hypothetical protein	TC	48099	49148	-	9.B.97.3.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature