dbCAN-seq: a database of CAZyme sequence and annotation

Home
Download
CAZyme Gene Cluster
Statistics
Links
Help
About Us

You are browsing environment: HUMAN GUT

help

CAZyme Gene Cluster: MGYG000004797_33|CGC1

You are here: cgc-> ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily | Substrate predicted by dbCAN-PUL search | Genomic context

CGC gene composition diagram

Gene detail information of MGYG000004797_02423

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02423
Location and strand information: 1379 - 2383 (-)
Family: GH43_18|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8801
Protein molecular weight: 38203.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02424

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02424
Location and strand information: 2465 - 6724 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene detail information of MGYG000004797_02425

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02425
Location and strand information: 6849 - 9398 (-)
Family: GH28|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3169
Protein molecular weight: 95820.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02426

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02426
Location and strand information: 9411 - 12719 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3294
Protein molecular weight: 122940.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02427

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02427
Location and strand information: 12956 - 14587 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000004797_02428

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02428
Location and strand information: 14964 - 17645 (-)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0453
Protein molecular weight: 101930.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02429

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02429
Location and strand information: 17894 - 19510 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000004797_02430

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02430
Location and strand information: 19530 - 22562 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene detail information of MGYG000004797_02431

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02431
Location and strand information: 22756 - 25623 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.5949
Protein molecular weight: 108286.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02432

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02432
Location and strand information: 25727 - 25834 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000004797_02433

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02433
Location and strand information: 25918 - 27147 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.713
Protein molecular weight: 46398.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02434

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02434
Location and strand information: 27137 - 28327 (-)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 6.0217
Protein molecular weight: 45482.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02435

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02435
Location and strand information: 28383 - 31361 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.4559
Protein molecular weight: 113246.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02436

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02436
Location and strand information: 31483 - 34269 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene detail information of MGYG000004797_02437

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02437
Location and strand information: 34401 - 36182 (-)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5504
Protein molecular weight: 66634.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02438

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02438
Location and strand information: 36186 - 37808 (-)
Family: GH27|CBM35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.786
Protein molecular weight: 61038.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02439

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02439
Location and strand information: 37830 - 39518 (-)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4558
Protein molecular weight: 64125.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02440

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02440
Location and strand information: 39540 - 40046 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000004797_02441

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02441
Location and strand information: 40149 - 41396 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.495
Protein molecular weight: 47965.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02442

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02442
Location and strand information: 41405 - 43882 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.873
Protein molecular weight: 93267.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000004797_02443

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02443
Location and strand information: 44096 - 46147 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000004797_02444

Gene clsuter ID: MGYG000004797_33|CGC1
Gene ID: MGYG000004797_02444
Location and strand information: 46161 - 49709 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene composition table

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004797_02423	hypothetical protein	CAZyme	1379	2383	-	GH43_18\| GH43
MGYG000004797_02424	Sensor histidine kinase RcsC	TF	2465	6724	-	HTH_AraC
MGYG000004797_02425	hypothetical protein	CAZyme	6849	9398	-	GH28\| GH43_24
MGYG000004797_02426	hypothetical protein	CAZyme	9411	12719	-	GH106
MGYG000004797_02427	hypothetical protein	null	12956	14587	-	Peptidase_S9\| Lipase_GDSL_2
MGYG000004797_02428	hypothetical protein	CAZyme	14964	17645	-	PL26
MGYG000004797_02429	hypothetical protein	null	17894	19510	-	SusD-like_3\| SusD_RagB
MGYG000004797_02430	TonB-dependent receptor SusC	TC	19530	22562	-	1.B.14.6.1
MGYG000004797_02431	Beta-galactosidase	CAZyme	22756	25623	-	GH2
MGYG000004797_02432	hypothetical protein	null	25727	25834	-	No domain
MGYG000004797_02433	hypothetical protein	CAZyme	25918	27147	-	GH154
MGYG000004797_02434	Unsaturated chondroitin disaccharide hydrolase	CAZyme	27137	28327	-	GH88
MGYG000004797_02435	Beta-galactosidase	CAZyme	28383	31361	-	GH2
MGYG000004797_02436	HTH-type transcriptional activator RhaR	TF	31483	34269	-	HTH_AraC
MGYG000004797_02437	hypothetical protein	CAZyme	34401	36182	-	GH78
MGYG000004797_02438	hypothetical protein	CAZyme	36186	37808	-	GH27\| CBM35
MGYG000004797_02439	hypothetical protein	CAZyme	37830	39518	-	GH78
MGYG000004797_02440	hypothetical protein	null	39540	40046	-	No domain
MGYG000004797_02441	hypothetical protein	CAZyme	40149	41396	-	CE12
MGYG000004797_02442	Beta-galactosidase BoGH2A	CAZyme	41405	43882	-	GH2
MGYG000004797_02443	hypothetical protein	null	44096	46147	-	SusD-like_3\| SusD_RagB
MGYG000004797_02444	TonB-dependent receptor SusC	TC	46161	49709	-	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location