dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01620
Location and strand information: 4516 - 7836 (+)
Family: GH35|GH43_24|GH43|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6594
Protein molecular weight: 125746.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01621
Location and strand information: 8158 - 10884 (-)
Family: HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01622
Location and strand information: 11145 - 14240 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.2297
Protein molecular weight: 117850.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01623
Location and strand information: 14390 - 16327 (-)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 5.8593
Protein molecular weight: 72875.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01624
Location and strand information: 16366 - 18900 (-)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2273
Protein molecular weight: 94942.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01625
Location and strand information: 18931 - 21858 (-)
Family: GH43_19|GH97
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0475
Protein molecular weight: 110471.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01626
Location and strand information: 21917 - 23917 (-)
Family: GH43|GH43_19|3.2.1.55|GH43_34
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9208
Protein molecular weight: 75664.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01627
Location and strand information: 24043 - 25167 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.859
Protein molecular weight: 43249.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01628
Location and strand information: 25390 - 26676 (-)
Family: PL42|4.2.2.-|GH145
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.165
Protein molecular weight: 49532.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01629
Location and strand information: 26716 - 27966 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8661
Protein molecular weight: 47918.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01630
Location and strand information: 28242 - 30260 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01631
Location and strand information: 30276 - 33593 (-)
Family: 1.B.14.6.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01632
Location and strand information: 33848 - 38044 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01633
Location and strand information: 38222 - 38389 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01634
Location and strand information: 38818 - 40716 (-)
Family: GH16|GH16_3|GH43_24|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.777
Protein molecular weight: 72801.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01635
Location and strand information: 40805 - 42283 (-)
Family: GH16_3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5514
Protein molecular weight: 55671.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01636
Location and strand information: 42303 - 43202 (-)
Family: CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.405
Protein molecular weight: 33239.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01637
Location and strand information: 43236 - 44903 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01638
Location and strand information: 44934 - 47954 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01639
Location and strand information: 47990 - 49915 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01640
Location and strand information: 49944 - 53096 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01641
Location and strand information: 53786 - 57997 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01642
Location and strand information: 58280 - 60295 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.349
Protein molecular weight: 76828.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01643
Location and strand information: 60429 - 61562 (+)
Family: null
Protein type: null
Protein description: Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01644
Location and strand information: 61635 - 62183 (+)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004876_16|CGC1
Gene ID: MGYG000004876_01645
Location and strand information: 62567 - 65899 (+)
Family: 1.B.14.6.2
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004876_01620	GH43_e161
MGYG000004876_01622	GH2_e4\|3.2.1.23	beta-galactan
MGYG000004876_01623	GH51_e23\|3.2.1.55	arabinan
MGYG000004876_01624	GH51_e23\|3.2.1.55	arabinan
MGYG000004876_01625	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000004876_01626	GH43_e38\|3.2.1.55	xylan
MGYG000004876_01627	GH105_e2\|3.2.1.-	pectin
MGYG000004876_01628	GH145_e0\|3.2.1.-
MGYG000004876_01629
MGYG000004876_01634	GH43_e135\|GH16_e47
MGYG000004876_01635
MGYG000004876_01636
MGYG000004876_01642

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004876_01620	hypothetical protein	CAZyme	4516	7836	+	GH35\| GH43_24\| GH43\| CBM32
MGYG000004876_01621	Sensor histidine kinase RcsC	STP	8158	10884	-	HisKA\| HATPase_c\| Response_reg
MGYG000004876_01622	Beta-galactosidase	CAZyme	11145	14240	-	GH2
MGYG000004876_01623	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	14390	16327	-	GH51
MGYG000004876_01624	hypothetical protein	CAZyme	16366	18900	-	GH51
MGYG000004876_01625	hypothetical protein	CAZyme	18931	21858	-	GH43_19\| GH97
MGYG000004876_01626	hypothetical protein	CAZyme	21917	23917	-	GH43\| GH43_19\| 3.2.1.55\| GH43_34
MGYG000004876_01627	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	24043	25167	-	GH105
MGYG000004876_01628	hypothetical protein	CAZyme	25390	26676	-	PL42\| 4.2.2.-\| GH145
MGYG000004876_01629	hypothetical protein	CAZyme	26716	27966	-	GH154
MGYG000004876_01630	hypothetical protein	null	28242	30260	-	SusD-like_3\| SusD_RagB
MGYG000004876_01631	hypothetical protein	TC	30276	33593	-	1.B.14.6.2
MGYG000004876_01632	Sensor histidine kinase RcsC	TF	33848	38044	-	HTH_AraC
MGYG000004876_01633	hypothetical protein	null	38222	38389	+	No domain
MGYG000004876_01634	hypothetical protein	CAZyme	38818	40716	-	GH16\| GH16_3\| GH43_24\| GH43
MGYG000004876_01635	hypothetical protein	CAZyme	40805	42283	-	GH16_3
MGYG000004876_01636	hypothetical protein	CAZyme	42303	43202	-	CBM32
MGYG000004876_01637	hypothetical protein	null	43236	44903	-	SusD-like_3\| SusD_RagB
MGYG000004876_01638	TonB-dependent receptor SusC	TC	44934	47954	-	1.B.14.6.1
MGYG000004876_01639	hypothetical protein	null	47990	49915	-	SusD-like_3\| SusD_RagB
MGYG000004876_01640	TonB-dependent receptor SusC	TC	49944	53096	-	1.B.14.6.1
MGYG000004876_01641	Sensor histidine kinase RcsC	TF	53786	57997	-	HTH_AraC
MGYG000004876_01642	hypothetical protein	CAZyme	58280	60295	+	GH154
MGYG000004876_01643	Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR	null	60429	61562	+	Radical_SAM\| HemN_C
MGYG000004876_01644	hypothetical protein	TF	61635	62183	+	GerE
MGYG000004876_01645	hypothetical protein	TC	62567	65899	+	1.B.14.6.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature