dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00482
Location and strand information: 67535 - 68578 (-)
Family: 3.A.1.11.7
Protein type: TC
Protein description: Spermidine/putrescine-binding periplasmic protein

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00483
Location and strand information: 68579 - 69373 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00484
Location and strand information: 69367 - 70188 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Spermidine/putrescine transport system permease protein PotB

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00485
Location and strand information: 70178 - 71254 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Spermidine/putrescine import ATP-binding protein PotA

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00486
Location and strand information: 71276 - 71815 (-)
Family: HTH_3
Protein type: TF
Protein description: HTH-type transcriptional regulator PuuR

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00487
Location and strand information: 71846 - 71965 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00488
Location and strand information: 72272 - 74620 (-)
Family: GH25
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.1262
Protein molecular weight: 85944.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00489
Location and strand information: 74775 - 76823 (-)
Family: GH25
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.3549
Protein molecular weight: 76158.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00490
Location and strand information: 76952 - 77959 (-)
Family: null
Protein type: null
Protein description: Tryptophan--tRNA ligase

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00491
Location and strand information: 78063 - 78971 (-)
Family: PALP
Protein type: STP
Protein description: Cysteine synthase

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00492
Location and strand information: 79293 - 81143 (-)
Family: 3.A.1.135.6
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000004891_4|CGC2
Gene ID: MGYG000004891_00493
Location and strand information: 81136 - 83388 (-)
Family: 3.A.1.135.6
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004891_00482	Spermidine/putrescine-binding periplasmic protein	TC	67535	68578	-	3.A.1.11.7
MGYG000004891_00483	hypothetical protein	TC	68579	69373	-	3.A.1.11.8
MGYG000004891_00484	Spermidine/putrescine transport system permease protein PotB	TC	69367	70188	-	3.A.1.11.8
MGYG000004891_00485	Spermidine/putrescine import ATP-binding protein PotA	TC	70178	71254	-	3.A.1.11.8
MGYG000004891_00486	HTH-type transcriptional regulator PuuR	TF	71276	71815	-	HTH_3
MGYG000004891_00487	hypothetical protein	null	71846	71965	-	No domain
MGYG000004891_00488	hypothetical protein	CAZyme	72272	74620	-	GH25
MGYG000004891_00489	hypothetical protein	CAZyme	74775	76823	-	GH25
MGYG000004891_00490	Tryptophan--tRNA ligase	null	76952	77959	-	tRNA-synt_1b
MGYG000004891_00491	Cysteine synthase	STP	78063	78971	-	PALP
MGYG000004891_00492	putative ABC transporter ATP-binding protein	TC	79293	81143	-	3.A.1.135.6
MGYG000004891_00493	Vitamin B12 import ATP-binding protein BtuD	TC	81136	83388	-	3.A.1.135.6
Protein ID	Protein Name	Type	Start	End	Strand	Signature