logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000004899_17|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000004899_02900
hypothetical protein
CAZyme 24614 27130 - GH8| GH43| CBM6| GH43_2
MGYG000004899_02901
Xylan 1,4-beta-xylosidase
CAZyme 27177 29747 - GH3
MGYG000004899_02902
TonB-dependent receptor SusC
TC 30766 33999 + 1.B.14.6.1
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is xylan

Protein ID eCAMI subfam CAZyme substrate
MGYG000004899_02900 GH8_e33|GH43_e168|CBM6_e28|3.2.1.156 xylan
MGYG000004899_02901 GH3_e159|3.2.1.55|3.2.1.37|3.2.1.21|3.2.1.- xylan|beta-glucan|arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig


Genomic location