dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00914
Location and strand information: 345247 - 348549 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: Vitamin B12 transporter BtuB

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00915
Location and strand information: 348565 - 350577 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00916
Location and strand information: 350706 - 351818 (+)
Family: GH16_3|GH43|GH43_24|GH16
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9437
Protein molecular weight: 42467.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00917
Location and strand information: 351866 - 353161 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.286
Protein molecular weight: 49728.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00918
Location and strand information: 353184 - 354494 (+)
Family: PL42|GH145
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.667
Protein molecular weight: 49896.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00919
Location and strand information: 354514 - 355632 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.8797
Protein molecular weight: 42796.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00920
Location and strand information: 355743 - 357683 (+)
Family: GH43_34|GH43|GH43_19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5109
Protein molecular weight: 73203.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00921
Location and strand information: 357710 - 359659 (+)
Family: GH97|GH43_19
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.0814
Protein molecular weight: 72956.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00922
Location and strand information: 359911 - 362424 (+)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2188
Protein molecular weight: 94056.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00923
Location and strand information: 362556 - 364562 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 7.6424
Protein molecular weight: 75130.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00924
Location and strand information: 364609 - 366549 (+)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 6.4408
Protein molecular weight: 72754.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00925
Location and strand information: 366629 - 369757 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.326
Protein molecular weight: 118890.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00926
Location and strand information: 369926 - 374026 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00927
Location and strand information: 374169 - 377240 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00928
Location and strand information: 377253 - 378875 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00929
Location and strand information: 378906 - 380435 (+)
Family: GH136
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5052
Protein molecular weight: 56056.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00930
Location and strand information: 380534 - 384667 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00931
Location and strand information: 385086 - 388361 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00932
Location and strand information: 388381 - 390432 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00933
Location and strand information: 390534 - 391670 (+)
Family: GH16|GH43|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5769
Protein molecular weight: 43456.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_3|CGC9
Gene ID: MGYG000004899_00934
Location and strand information: 391977 - 395291 (-)
Family: GH43|GH43_24|CBM32|GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2946
Protein molecular weight: 125421.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004899_00916	GH43_e135\|GH16_e47
MGYG000004899_00917
MGYG000004899_00918	GH145_e0\|3.2.1.-
MGYG000004899_00919	GH105_e2\|3.2.1.-	pectin
MGYG000004899_00920	GH43_e38\|3.2.1.55	xylan
MGYG000004899_00921	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000004899_00922	GH51_e23\|3.2.1.55	arabinan
MGYG000004899_00923	GH127_e7
MGYG000004899_00924	GH51_e23\|3.2.1.55	arabinan
MGYG000004899_00925	GH2_e51
MGYG000004899_00929
MGYG000004899_00933	GH43_e135\|GH16_e47
MGYG000004899_00934	GH43_e161

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004899_00914	Vitamin B12 transporter BtuB	TC	345247	348549	+	1.B.14.6.1
MGYG000004899_00915	hypothetical protein	null	348565	350577	+	SusD-like_3\| SusD_RagB
MGYG000004899_00916	hypothetical protein	CAZyme	350706	351818	+	GH16_3\| GH43\| GH43_24\| GH16
MGYG000004899_00917	hypothetical protein	CAZyme	351866	353161	+	GH154
MGYG000004899_00918	hypothetical protein	CAZyme	353184	354494	+	PL42\| GH145
MGYG000004899_00919	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	354514	355632	+	GH105
MGYG000004899_00920	hypothetical protein	CAZyme	355743	357683	+	GH43_34\| GH43\| GH43_19
MGYG000004899_00921	Retaining alpha-galactosidase	CAZyme	357710	359659	+	GH97\| GH43_19
MGYG000004899_00922	hypothetical protein	CAZyme	359911	362424	+	GH51
MGYG000004899_00923	Non-reducing end beta-L-arabinofuranosidase	CAZyme	362556	364562	+	GH127
MGYG000004899_00924	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	364609	366549	+	GH51
MGYG000004899_00925	Beta-galactosidase	CAZyme	366629	369757	+	GH2
MGYG000004899_00926	Sensor histidine kinase RcsC	TF	369926	374026	+	HTH_AraC
MGYG000004899_00927	TonB-dependent receptor SusC	TC	374169	377240	+	1.B.14.6.1
MGYG000004899_00928	hypothetical protein	TC	377253	378875	+	8.A.46.1.3
MGYG000004899_00929	hypothetical protein	CAZyme	378906	380435	+	GH136
MGYG000004899_00930	Sensor histidine kinase RcsC	TF	380534	384667	+	HTH_AraC
MGYG000004899_00931	hypothetical protein	TC	385086	388361	+	1.B.14.6.1
MGYG000004899_00932	hypothetical protein	null	388381	390432	+	SusD-like_3\| SusD_RagB
MGYG000004899_00933	hypothetical protein	CAZyme	390534	391670	+	GH16\| GH43\| GH43_24
MGYG000004899_00934	hypothetical protein	CAZyme	391977	395291	-	GH43\| GH43_24\| CBM32\| GH35
Protein ID	Protein Name	Type	Start	End	Strand	Signature