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CAZyme Information: MGYG000002886_00146

You are here: Home > Sequence: MGYG000002886_00146

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Stenotrophomonas maltophilia
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia
CAZyme ID MGYG000002886_00146
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1039 MGYG000002886_3|CGC1 112435.76 6.7439
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002886 4276654 MAG United States North America
Gene Location Start: 10619;  End: 13738  Strand: -

Full Sequence      Download help

MTLRAERSKV  FRSAIPWRSA  IALLLAALAS  SAQAQTLPPR  SQWQASSSSQ  QVPAMAIGHL60
IDGDPKTVTG  GAFSPGHWFQ  IDLGAPTLLA  GARLTWDVSN  PEGYSLQTSL  DGTQWQTAYT120
MADSLGDVET  LYFAPRQARY  LRLASPQRTA  DWGVSIFEME  PLDSTLSARI  RGVDAAQAAA180
LWQGGGTVAV  PAGTNGSHAL  EITLPQAQST  AGLVVDWADG  NRGPARLQVQ  DAQGRWQDLA240
HDAQAASHRQ  SWLAANAAQA  MRAFRLSVDG  SAPKVARLRL  LGPKAVMTPM  NQYQIAASGA300
QRALFPASLQ  MQQTYWTAVG  VHAGRQKSIF  DEYGNLEAFK  GAPLVQPIWR  SADGSTAGAA360
GQNVQHALRD  GWKPMPSATW  SPQPGLELRS  EVFAIERNGQ  PVTFLRHRLH  NTGGTRIDGT420
LSLVVRPMQM  NPPWQNGGLS  PIRDVAIDGQ  AVRINGRMLL  QSLTPVTASG  AAPFGRDGAT480
EITANVAAGH  LPSTQQARDD  EGLASAALNY  RVSLAPGASD  AIVVAFPLGT  ATTDSKGALP540
EAPALDLATL  PRDANAAFDS  LATQASADWQ  VRLGQVGLRL  PDPSLVDMLR  AQAAYMLINQ600
TGPAMQPGPR  NYNRSFIRDG  MATSAVLLRM  GEARVARDYL  AWYSEHGVHA  NGLVSPILND660
DGSVNTGFGS  DIEYDSQGQY  VALVADVARL  DGGPESVRAY  LPKVKAALQF  LQELRERTLV720
PGYKADQPAP  ERFAGILAPS  ISHEGYPSPT  HSYWDDYWGL  KGWHDGAWLA  ESLGDHETAR780
WAREQYTLLY  DALHASIRAT  MAWKGIDFIP  SSADLGDGDP  TGVSIALDPT  GAQSVLPAEA840
LRTTFARYLE  DVRKRSQPDA  LYAYTPYEIR  NVLSYVHLGQ  PQVADELLQG  LLHDRRPLEW900
QVLAEVVHSR  LRFPRYLGDM  PHTWIGAEYG  RTLFGMLMRE  DDDALSLLPG  TPPSWVAGDG960
LAVERLPTAY  GTLQMQARQR  DGTLTVTLGK  GLRSGTAVKV  WWPARTMPKT  VRVDGHSVSD1020
FDAEGVRLAK  PFRTLEARW1039

Enzyme Prediction      help

No EC number prediction in MGYG000002886_00146.

CAZyme Signature Domains help

Created with Snap5110315520725931136341546751957162367572777983188393598744159CBM32
Family Start End Evalue family coverage
CBM32 44 159 4.1e-20 0.9354838709677419

CDD Domains      download full data without filtering help

Created with Snap5110315520725931136341546751957162367572777983188393598760159F5_F8_type_C59162FA58C59144Glyco_hydro_106
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 4.50e-11 60 159 17 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 8.21e-07 59 162 27 142
Substituted updates: Jan 31, 2002
pfam17132 Glyco_hydro_106 0.003 59 144 187 283
alpha-L-rhamnosidase.

CAZyme Hits      help

Created with Snap5110315520725931136341546751957162367572777983188393598711039AYZ69927.1|CBM3211039QGL67564.1|CBM3211039SNW09680.1|CBM3211039AIL10414.1|CBM3211039AVH90368.1|CBM32
Hit ID E-Value Query Start Query End Hit Start Hit End
AYZ69927.1 0.0 1 1039 1 1039
QGL67564.1 0.0 1 1039 1 1039
SNW09680.1 0.0 1 1039 1 1039
AIL10414.1 0.0 1 1039 1 1039
AVH90368.1 0.0 1 1039 1 1039

PDB Hits      download full data without filtering help

Created with Snap51103155207259311363415467519571623675727779831883935987611602RVA_A611604ZZ5_A781602RV9_A781604ZXE_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2RVA_A 1.31e-08 61 160 30 134
Solutionstructure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis]
4ZZ5_A 1.34e-08 61 160 31 135
X-raycrystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ5_B X-ray crystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ8_A X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ8_B X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis]
2RV9_A 2.37e-08 78 160 48 133
Solutionstructure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis]
4ZXE_A 2.42e-08 78 160 49 134
X-raycrystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis],4ZXE_B X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis],4ZXE_C X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000436 0.998659 0.000361 0.000209 0.000162 0.000142

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002886_00146.