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CAZyme Information: MGYG000000874_00287

You are here: Home > Sequence: MGYG000000874_00287

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-267 sp900551865
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; RF32; CAG-239; CAG-267; CAG-267 sp900551865
CAZyme ID MGYG000000874_00287
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
766 87965.45 6.2954
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000874 1307174 MAG United States North America
Gene Location Start: 57238;  End: 59538  Strand: +

Full Sequence      Download help

MADTVKKQTV  KSENNGQPQS  FAVLSSCNGE  NMKNLLSKKE  MDCIINGDYE  NVMAVLGIHR60
DKGSKEVYIR  AYKPNTKSIE  LLDGNGNSLG  LMAKLDKRGF  YQINLGVTNT  DNFTHKFKIT120
NDKNETYVEE  DIYSFPSILG  DIDEYLFAEG  NHLDLYKKLG  AHLMEINGVK  GVGFSVWAPN180
AKRVSVVGAF  NNWDGRVNVM  RKHYNCGVWD  IFIPNIGEGE  LYKYEVKTQE  GYILTKSDPM240
AFYAEVRPKT  ASVVYDLNHY  KWNDGEWMKY  REAYNSFDRP  TSIYEVHLGS  WRRKGENGSE300
FLNYRELADT  LVPYVMNMGF  THVEFLPVCE  HPFDGSWGYQ  VTGLFAPTSR  FGTPDDFRYM360
IDKFHQANIG  VIMDWVPAHF  PKDGHGLIEF  DGTHLYEHAD  PRKGEHKDWG  TKIYNYGRTE420
VSNVLCSSAL  YWLKEYHIDG  LRVDAVASML  YLDYSRKAGE  WIPNIYGGNE  NLEAIAFIRK480
MNELCYGTCP  GIMTCAEEST  AWPMVSRPTS  MGGLGFGYKW  NMGWMNDTLN  YISKDPIYRK540
YEHGKLTFGL  LYAFNENFIL  PISHDEVVHG  KGSMLGKMPG  DEWQKFANLR  AYYGFMWTHP600
GKKLLFMGCE  FGQDWEWNAN  ESLRWHLLQY  PMYKGMQNCV  RDLNLMYKGN  SAFYEEDFDG660
KGFEWIDHAN  ANDSVISYIR  RGHDYNNYMI  VISNFTPVVR  HGFKIGVPDS  GAYQEIFNSD720
DKNYWGSGVK  NEGELIASDE  GMHGRPHSIE  LTLPPLSTIV  LKHIRY766

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Created with Snap3876114153191229268306344383421459497536574612651689727313613GH13158242CBM48
Family Start End Evalue family coverage
GH13 313 613 1.8e-164 0.9966777408637874
CBM48 158 242 4.4e-18 0.881578947368421

CDD Domains      download full data without filtering help

Created with Snap387611415319122926830634438342145949753657461265168972740763PRK05402159764PRK1470644756PRK14705137763PRK12313134762GlgB
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05402 PRK05402 0.0 40 763 5 723
1,4-alpha-glucan branching protein GlgB.
PRK14706 PRK14706 0.0 159 764 27 622
glycogen branching enzyme; Provisional
PRK14705 PRK14705 0.0 44 756 511 1215
glycogen branching enzyme; Provisional
PRK12313 PRK12313 0.0 137 763 5 627
1,4-alpha-glucan branching protein GlgB.
COG0296 GlgB 0.0 134 762 1 627
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap387611415319122926830634438342145949753657461265168972744762ABG03292.1|CBM48|GH13_944762BBL80851.1|CBM48|GH13_944762QYJ16550.1|CBM48|GH13_944762VBB68904.1|CBM48|GH13_944762AUG56211.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
ABG03292.1 0.0 44 762 10 718
BBL80851.1 0.0 44 762 10 718
QYJ16550.1 0.0 44 762 10 717
VBB68904.1 0.0 44 762 13 733
AUG56211.1 2.05e-317 44 762 14 731

PDB Hits      download full data without filtering help

Created with Snap3876114153191229268306344383421459497536574612651689727297625GQW_A297625GR1_A297625GQZ_A297625GR5_A297625GR0_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GQW_A 3.86e-286 29 762 18 772
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR1_A 2.21e-285 29 762 18 772
Crystalstructure of branching enzyme Y500A/D501A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142],5GR6_A Crystal structure of branching enzyme Y500A/D501A double mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A 4.43e-285 29 762 18 772
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GR5_A 6.28e-285 29 762 18 772
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GR0_A 6.28e-285 29 762 18 772
Crystalstructure of branching enzyme D501A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap387611415319122926830634438342145949753657461265168972744762sp|Q1AZ86|GLGB_RUBXD44762sp|Q2RR72|GLGB_RHORT35765sp|Q2W2Q6|GLGB_MAGSA44761sp|Q11EX1|GLGB_CHESB36759sp|Q165E2|GLGB_ROSDO
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1AZ86 0.0 44 762 10 718
1,4-alpha-glucan branching enzyme GlgB OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=glgB PE=3 SV=1
Q2RR72 3.15e-311 44 762 13 731
1,4-alpha-glucan branching enzyme GlgB OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=glgB PE=3 SV=1
Q2W2Q6 3.73e-300 35 765 17 740
1,4-alpha-glucan branching enzyme GlgB OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=glgB PE=3 SV=1
Q11EX1 4.00e-299 44 761 21 734
1,4-alpha-glucan branching enzyme GlgB OS=Chelativorans sp. (strain BNC1) OX=266779 GN=glgB PE=3 SV=1
Q165E2 1.80e-293 36 759 3 724
1,4-alpha-glucan branching enzyme GlgB OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) OX=375451 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000874_00287.