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CAZyme Information: MGYG000001998_00038

You are here: Home > Sequence: MGYG000001998_00038

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnospira sp900552795
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp900552795
CAZyme ID MGYG000001998_00038
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
787 90406.29 5.0237
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001998 2300661 MAG Spain Europe
Gene Location Start: 47573;  End: 49936  Strand: +

Full Sequence      Download help

MADKLYDLMN  WPEIEAVVYS  EADNPYNFLG  GHVCKNGFLI  QVFRPDAVAI  QVSVQGIKKL60
YQMEKVDEAG  FFAVLIPLKK  QADYELIIED  IKGIKTTVRD  PYSFGCMLDE  KNMKRFNLGT120
GIDAYKFMGS  HYMQADGVGG  MHFAVWAPNA  KRVSVVGEFN  RWDGRIYQMQ  RNGDSGIFEL180
FIPGMEPGIS  YCYEVKFKNG  VIIRKLDPYA  CNIKNDTRAV  SVAAQSTDEY  KWNDKAWMNK240
KEIFSDEAPV  SICEIDIDDI  LKDDIVENVS  EAGFNCVVIT  TAAACIDKRN  TTEISAFFSP300
HLSYEKPDML  QSVIDSFHQK  NIAVIMDWYA  AYLSQTPSGM  IYFDGSYAYE  KNWVRLYRQK360
NIEVSTFDYD  KPQVMTFLYS  NFMFWLEKYH  FDGMRINELA  SMLYLNYGRN  AGEWIPNIYG420
GNENLAAIEF  VKGLSRLIDK  CSRKPLLIAE  DDSGWPCVTV  PVKDGGLGFD  YKQNDGWKKE480
IVPFMELDPL  FRKGSYEKLT  YGMLYQYSEN  FILDFSRISD  DWKERGLYDR  MPLCGKTDEA540
AEEIKKENLK  AVLAFMYTHP  GKKLINYKDC  RRCADFIKKL  NDLYISYTPM  YELDNENDGF600
EWVDNVSCEE  TVIAYERKSS  SGDKLLNAIN  FTPVLRQDFR  FGVPCKGKYK  VVFCSDKSFN660
GKEYRTEEYE  YNGKADSVLV  TLPPLGVICL  VYESYSQIEL  EEIQIKKEAA  MAKEKASLEA720
KEAEKLKEEA  IEHAKIAKEA  EERAKEAAKE  AVKAAKEAQK  KASMAEKNSI  RIDEEMKRRL780
EALLRKE787

Enzyme Prediction      help

No EC number prediction in MGYG000001998_00038.

CAZyme Signature Domains help

Created with Snap3978118157196236275314354393432472511550590629668708747269566GH13128214CBM48
Family Start End Evalue family coverage
GH13 269 566 9.5e-78 0.9667774086378738
CBM48 128 214 3.9e-18 0.9078947368421053

CDD Domains      download full data without filtering help

Created with Snap397811815719623627531435439343247251155059062966870874713694PRK05402107693PRK12313103690GlgB12693PRK1256814686PRK14705
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05402 PRK05402 0.0 13 694 5 725
1,4-alpha-glucan branching protein GlgB.
PRK12313 PRK12313 4.75e-151 107 693 6 628
1,4-alpha-glucan branching protein GlgB.
COG0296 GlgB 3.24e-123 103 690 1 626
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK12568 PRK12568 5.01e-117 12 693 13 729
glycogen branching enzyme; Provisional
PRK14705 PRK14705 7.14e-106 14 686 508 1216
glycogen branching enzyme; Provisional

CAZyme Hits      help

Created with Snap39781181571962362753143543934324725115505906296687087471716ACR71776.1|CBM48|GH13_91715AOZ96491.1|CBM48|GH13_91716QNM06418.1|CBM48|GH13_91688SET97328.1|CBM48|GH13_91688QRV19504.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
ACR71776.1 6.67e-183 1 716 1 721
AOZ96491.1 5.49e-174 1 715 1 733
QNM06418.1 6.98e-166 1 716 1 758
SET97328.1 2.34e-164 1 688 1 738
QRV19504.1 2.56e-164 1 688 1 738

PDB Hits      download full data without filtering help

Created with Snap3978118157196236275314354393432472511550590629668708747136905GQZ_A136905GQW_A136905GR5_A136905GQU_A136906KLF_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GQZ_A 2.46e-115 13 690 29 771
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQW_A 3.44e-115 13 690 29 771
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 3.44e-115 13 690 29 771
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A 3.44e-115 13 690 29 771
Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
6KLF_A 3.67e-115 13 690 5 747
ChainA, 1,4-alpha-glucan branching enzyme GlgB [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap397811815719623627531435439343247251155059062966870874714690sp|Q2RR72|GLGB_RHORT12690sp|Q608L5|GLGB_METCA14690sp|Q3JCN0|GLGB_NITOC24690sp|Q81ZU6|GLGB_NITEU12692sp|Q2YB47|GLGB_NITMU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2RR72 1.57e-131 14 690 10 730
1,4-alpha-glucan branching enzyme GlgB OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=glgB PE=3 SV=1
Q608L5 2.33e-126 12 690 12 723
1,4-alpha-glucan branching enzyme GlgB OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=glgB PE=3 SV=1
Q3JCN0 2.27e-125 14 690 19 730
1,4-alpha-glucan branching enzyme GlgB OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=glgB PE=3 SV=1
Q81ZU6 1.76e-123 24 690 27 729
1,4-alpha-glucan branching enzyme GlgB OS=Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298) OX=228410 GN=glgB PE=3 SV=1
Q2YB47 3.41e-123 12 692 16 736
1,4-alpha-glucan branching enzyme GlgB OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) OX=323848 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000085 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001998_00038.