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CAZyme Information: MGYG000003189_00288

You are here: Home > Sequence: MGYG000003189_00288

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Haemophilus_D parainfluenzae_M
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pasteurellaceae; Haemophilus_D; Haemophilus_D parainfluenzae_M
CAZyme ID MGYG000003189_00288
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
729 84058.55 5.2397
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003189 2132219 MAG United States North America
Gene Location Start: 39585;  End: 41774  Strand: -

Full Sequence      Download help

MTKLVSQSVI  NSFFDGKHAD  PFAVLGMHET  HNGIEVRALL  PDADKVEVID  KENQSIVVVL60
EKVDYRGFFT  AIVPEIHHFF  VYQLKVYWGT  EAQIIEDPYR  FHPMINDLDQ  WLLAEGSLLR120
PYEVLGAHFT  ECDGVPGVNF  RVWAPNAKRV  SLVGDFNYWD  GHRHPMRFHS  KSGVWELFLP180
KVSLGQLYKF  ELIDCFGNLR  LKADPYAFSS  QLRPDTASQV  STLPNVVEMT  EARKKANQGN240
QPISIYEVHL  GSWRRNLENN  FWLDYDQIAD  ELIPYVKDMG  FTHIEFLPLS  EFPFDGSWGY300
QPIGLYSPTS  RFGSPEAFRR  LVKRAHEAGI  NVILDWVPGH  FPSDTHGLVE  FDGTALYEYA360
DLREGYHQDW  NTLIYNYGRN  EVKNFLSSNA  LYWLERFGLD  GIRVDAVASM  IYRDYSRAEG420
EWIPNQYGGR  ENLEAIEFLK  HTNWKIHSEM  AGAISIAEES  TSFAGVTHPS  ENGGLGFNFK480
WNMGWMNDTL  AYMQLDPIYR  QYHHNKMTFG  MMYQYSENFV  LPLSHDEVVH  GKYSLLDKMP540
GDAWQKFANL  RAYYGYMWGH  PGKKLLFMGN  EFAQGREWNY  EESLDWFLLD  ENIGGGWHKG600
VLKLVKDLNH  IYRENSPLFE  LDYSPEGFDW  LVVDDSANSV  FAFERRSSNG  ERIIVISNFT660
PVPRHNYRIG  VNVAGTYEEI  LNTDSMYYQG  SNVGNFGYVT  SEEIESHGRE  NSISISIPPL720
ATVYLKYNL729

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Created with Snap3672109145182218255291328364400437473510546583619656692274574GH13125210CBM48
Family Start End Evalue family coverage
GH13 274 574 3.8e-160 0.9966777408637874
CBM48 125 210 6.9e-22 0.8947368421052632

CDD Domains      download full data without filtering help

Created with Snap3672109145182218255291328364400437473510546583619656692102727PRK12313100727GlgB16726PRK14705113727PRK147065726PRK05402
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12313 PRK12313 0.0 102 727 4 627
1,4-alpha-glucan branching protein GlgB.
COG0296 GlgB 0.0 100 727 1 628
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK14705 PRK14705 0.0 16 726 514 1221
glycogen branching enzyme; Provisional
PRK14706 PRK14706 0.0 113 727 15 621
glycogen branching enzyme; Provisional
PRK05402 PRK05402 0.0 5 726 1 722
1,4-alpha-glucan branching protein GlgB.

CAZyme Hits      help

Created with Snap36721091451822182552913283644004374735105465836196566921729SQH97621.1|CBM48|GH13_91729AVM60612.1|CBM48|GH13_91728SNV83785.1|CBM48|GH13_91727QOR13185.1|CBM48|GH13_91727QOR11382.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
SQH97621.1 0.0 1 729 1 729
AVM60612.1 0.0 1 729 1 729
SNV83785.1 0.0 1 728 1 728
QOR13185.1 0.0 1 727 1 727
QOR11382.1 0.0 1 727 1 727

PDB Hits      download full data without filtering help

Created with Snap36721091451822182552913283644004374735105465836196566921197254LPC_A1127251M7X_A17265GQW_A17265GR5_A17265GQZ_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4LPC_A 0.0 119 725 3 607
CrystalStructure of E.Coli Branching Enzyme in complex with maltoheptaose [Escherichia coli],4LPC_B Crystal Structure of E.Coli Branching Enzyme in complex with maltoheptaose [Escherichia coli],4LPC_C Crystal Structure of E.Coli Branching Enzyme in complex with maltoheptaose [Escherichia coli],4LPC_D Crystal Structure of E.Coli Branching Enzyme in complex with maltoheptaose [Escherichia coli],4LQ1_A Crystal Structure of E.Coli Branching Enzyme in complex with maltohexaose [Escherichia coli],4LQ1_B Crystal Structure of E.Coli Branching Enzyme in complex with maltohexaose [Escherichia coli],4LQ1_C Crystal Structure of E.Coli Branching Enzyme in complex with maltohexaose [Escherichia coli],4LQ1_D Crystal Structure of E.Coli Branching Enzyme in complex with maltohexaose [Escherichia coli],5E6Y_A Crystal structure of E.Coli branching enzyme in complex with alpha cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E6Y_B Crystal structure of E.Coli branching enzyme in complex with alpha cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E6Y_C Crystal structure of E.Coli branching enzyme in complex with alpha cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E6Y_D Crystal structure of E.Coli branching enzyme in complex with alpha cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E6Z_A Crystal structure of Ecoli Branching Enzyme with beta cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E6Z_B Crystal structure of Ecoli Branching Enzyme with beta cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E6Z_C Crystal structure of Ecoli Branching Enzyme with beta cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E6Z_D Crystal structure of Ecoli Branching Enzyme with beta cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E70_A Crystal structure of Ecoli Branching Enzyme with gamma cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E70_B Crystal structure of Ecoli Branching Enzyme with gamma cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E70_C Crystal structure of Ecoli Branching Enzyme with gamma cyclodextrin [Escherichia coli O139:H28 str. E24377A],5E70_D Crystal structure of Ecoli Branching Enzyme with gamma cyclodextrin [Escherichia coli O139:H28 str. E24377A]
1M7X_A 0.0 112 725 1 612
TheX-ray Crystallographic Structure of Branching Enzyme [Escherichia coli],1M7X_B The X-ray Crystallographic Structure of Branching Enzyme [Escherichia coli],1M7X_C The X-ray Crystallographic Structure of Branching Enzyme [Escherichia coli],1M7X_D The X-ray Crystallographic Structure of Branching Enzyme [Escherichia coli]
5GQW_A 3.23e-252 1 726 21 772
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 4.57e-252 1 726 21 772
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A 6.47e-252 1 726 21 772
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap36721091451822182552913283644004374735105465836196566921725sp|Q1R5J4|GLGB_ECOUT1726sp|Q65TI0|GLGB_MANSM1725sp|Q57IT8|GLGB_SALCH1726sp|Q4QK67|GLGB_HAEI81725sp|Q664I2|GLGB_YERPS
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1R5J4 0.0 1 725 1 723
1,4-alpha-glucan branching enzyme GlgB OS=Escherichia coli (strain UTI89 / UPEC) OX=364106 GN=glgB PE=3 SV=1
Q65TI0 0.0 1 726 1 726
1,4-alpha-glucan branching enzyme GlgB OS=Mannheimia succiniciproducens (strain MBEL55E) OX=221988 GN=glgB PE=3 SV=1
Q57IT8 0.0 1 725 1 723
1,4-alpha-glucan branching enzyme GlgB OS=Salmonella choleraesuis (strain SC-B67) OX=321314 GN=glgB PE=3 SV=1
Q4QK67 0.0 1 726 1 726
1,4-alpha-glucan branching enzyme GlgB OS=Haemophilus influenzae (strain 86-028NP) OX=281310 GN=glgB PE=3 SV=1
Q664I2 0.0 1 725 1 723
1,4-alpha-glucan branching enzyme GlgB OS=Yersinia pseudotuberculosis serotype I (strain IP32953) OX=273123 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000048 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003189_00288.