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CAZyme Information: MGYG000003858_00506

You are here: Home > Sequence: MGYG000003858_00506

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UMGS363;
CAZyme ID MGYG000003858_00506
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
715 MGYG000003858_11|CGC1 82684.57 6.7527
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003858 2536747 MAG United States North America
Gene Location Start: 28647;  End: 30794  Strand: -

Full Sequence      Download help

MPNSRKKTAV  SEEIDCRFPL  HIFHEGTSVE  AYDFFGAHKG  TKDGKKGVYF  RVWAPHAASV60
SLVGDFNDWD  RRRNPMTRLV  DDETWVCFVE  NVEQYFTYKY  SIETRHQSIL  LKADPYGTHM120
ETRPATATKY  FDIDGFKWTD  KAWYDTKAKT  NVYKSPMNIY  EVHLGSWRTY  EDGEPFNYVK180
FAEEMVPYLK  DMSYTHIELM  PLAEYPYDGS  WGYQIIGYYA  PTSRYGTPFD  FMKMIDIFHK240
NNIGVILDWV  PAHFPKDAAG  LFEFDGDCCY  EYSDPLKKEH  TSWGTRVFDF  GRNEVKSFLI300
SNALYWIEKF  HVDGLRVDAV  ASMLYLDYDR  RDGEWRPNKD  GGRENYEAVE  FLRTLNTAVF360
GRNPNTLMIA  EESTAWPLVT  KPADVGGLGF  NFKWNMGWMN  DSLDYMKLDP  IYRANNHGKL420
TFSFFYCFSE  NYILPISHDE  VVHGKCSLWR  KMSGAYNTDK  FSTLRTFMMY  MAMHPGKKLS480
FMGNEFGQEN  EWNYEKALDW  YLLDTPEHAQ  IEQFSKDLNR  FYLENPPLWQ  HDDDWNGFAW540
ICHDDYLQSV  ISFRRIDDEG  NEVIIVCNFV  PVKRENYRIG  VPREGCWQQV  LSTDEAKYGG600
SGTVNNKKKK  TEDYSMHGCE  QSIVIDIAPL  SAMLFKFVPA  KKRTPKEEKT  PAKTTKTAKA660
SKTLKKAEMP  AAKTAVSEEP  EPKTAKPKTS  AAGAISSTAK  ASAKTVTKSP  EKIKK715

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Created with Snap3571107143178214250286321357393429464500536572607643679187488GH1335118CBM48
Family Start End Evalue family coverage
GH13 187 488 1.8e-148 0.9966777408637874
CBM48 35 118 1.6e-18 0.868421052631579

CDD Domains      download full data without filtering help

Created with Snap357110714317821425028632135739342946450053657260764367918640PRK0540234652PRK1470620643PRK1231313636PRK1470518636GlgB
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05402 PRK05402 0.0 18 640 103 726
1,4-alpha-glucan branching protein GlgB.
PRK14706 PRK14706 0.0 34 652 26 639
glycogen branching enzyme; Provisional
PRK12313 PRK12313 0.0 20 643 12 633
1,4-alpha-glucan branching protein GlgB.
PRK14705 PRK14705 0.0 13 636 605 1221
glycogen branching enzyme; Provisional
COG0296 GlgB 0.0 18 636 9 627
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap357110714317821425028632135739342946450053657260764367918643CBL16844.1|CBM48|GH13_915645CCO05861.1|CBM48|GH13_99645CBL34144.1|CBM48|GH13_99645CBK95803.1|CBM48|GH13_919642CBL01646.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
CBL16844.1 3.35e-302 18 643 11 632
CCO05861.1 1.69e-299 15 645 8 636
CBL34144.1 5.96e-296 9 645 2 635
CBK95803.1 3.42e-295 9 645 2 635
CBL01646.1 1.42e-293 19 642 16 637

PDB Hits      download full data without filtering help

Created with Snap3571107143178214250286321357393429464500536572607643679206415GR1_A206415GR0_A206415GQW_A206415GR5_A206415GQZ_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GR1_A 1.68e-216 20 641 134 777
Crystalstructure of branching enzyme Y500A/D501A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142],5GR6_A Crystal structure of branching enzyme Y500A/D501A double mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GR0_A 2.38e-216 20 641 134 777
Crystalstructure of branching enzyme D501A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQW_A 2.38e-216 20 641 134 777
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 3.37e-216 20 641 134 777
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A 4.77e-216 20 641 134 777
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap357110714317821425028632135739342946450053657260764367910636sp|B8CVY1|GLGB_HALOH17639sp|Q2JK68|GLGB_SYNJB4634sp|Q11EX1|GLGB_CHESB21636sp|Q7NL20|GLGB_GLOVI6643sp|P30539|GLGB_BUTFI
Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8CVY1 1.31e-234 10 636 1 626
1,4-alpha-glucan branching enzyme GlgB OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=glgB PE=3 SV=1
Q2JK68 9.94e-224 17 639 108 755
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=glgB PE=3 SV=1
Q11EX1 7.00e-223 4 634 95 733
1,4-alpha-glucan branching enzyme GlgB OS=Chelativorans sp. (strain BNC1) OX=266779 GN=glgB PE=3 SV=1
Q7NL20 1.19e-222 21 636 109 727
1,4-alpha-glucan branching enzyme GlgB OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=glgB PE=3 SV=1
P30539 3.20e-222 6 643 3 638
1,4-alpha-glucan branching enzyme GlgB OS=Butyrivibrio fibrisolvens OX=831 GN=glgB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000062 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003858_00506.